Job Description P76658 Confidence 99.56% Date Thu Jan 5 12:25:18 GMT 2012 Rank 62 Aligned Residues 214 % Identity 19% Template d1jxha_ SCOP info Ribokinase-like Ribokinase-like Thiamin biosynthesis kinases Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		F	E	R	A	G	V	M	V	V	G	D	V	M	L	D	R	Y	W	Y	G	P	T	S	R	I	S	P	E	A	P	V	P	V	V	K	V	N	T	I	E	E	R	P	G	G	A	A	N	V	A	M	.	.	N	I	A	S	L	G	A	N	A	R	L	V	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S
Query Conservation																																																					.	.
Alig confidence														.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	Q	R	I	N	A	L	T	I	A	G	T	.	.	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G	G	A	G	I	Q	A	D	L	K	T	F	S	A	L	G	A	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S												T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.			.																											.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	V	N	V	K	C	D	F	V	S	V	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	E	G	F	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L	S	D	Y	A	K	G	A	L	A	S	V	Q	Q	M	I	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	S	V	I	T	A	L	V	A	E	N	T	C	G	V	Q	S	V	Y	.	.	.	.	.	R	I	E	P	D	F	V	A	A	Q	L	D	S	V	F	S	D	V	R	I	D	T	T	K	I	G	M	L	A	E	T	D	I	V	E	A	V	A	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T							.	.	.	.	.																T	T	S			S									S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
																			35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		166	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure						.																.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence						.																.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		L	A	R	K	.	A	G	V	P	V	L	I	D	P	K	G	T	D	F	E	.	.	.	.	.	.	.	.	.	.	R	Y	R	G	A	T	L	L	T	P	N	L	S	E	F	E	A	V	V	G	K	.	C	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L	S	A	L	L	V	T	R	S
Query Conservation						.																.	.	.	.	.	.	.	.	.	.																						.
Alig confidence						.																.	.	.	.	.	.	.	.	.	.																						.																											.	.
Template Conservation																																																																																.	.
Template Sequence		R	L	Q	R	H	H	V	R	N	V	V	L	D	T	V	M	L	L	L	S	P	S	A	I	E	T	L	R	V	R	L	L	P	Q	V	S	L	I	T	P	N	L	P	E	A	A	A	L	L	D	A	P	H	A	R	T	E	Q	E	M	L	A	Q	G	R	A	L	L	A	M	G	C	E	A	V	L	M	K	.	.
Template Known Secondary structure						T	T			S																						T	G	G	G		S					B									T						S														T	T		S					B	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	M	S	L	L	Q	P	G	K	A	P	L	H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	A	G	N	S	L	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K
Query Conservation
Alig confidence		.	.													.	.	.	.
Template Conservation		.	.													.	.	.	.
Template Sequence		.	.	G	D	W	L	F	T	R	E	G	E	Q	R	.	.	.	.	F	R	V	N	T	K	N	T	H	G	T	G	C	T	L	S	A	A	L	A	A	L	R	P	R	H	R	S	W	G	E	T	V	N	E	A	K	A	W	L	S	A	A	L	A	Q
Template Known Secondary structure		.	.							S	S					.	.	.	.						S			B	T													G	G	G	S	S	S																	T	T
Template Predicted Secondary structure		.	.													.	.	.	.
Template SS confidence
				177	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions