Job Description P76658 Confidence 99.79% Date Thu Jan 5 12:25:18 GMT 2012 Rank 52 Aligned Residues 135 % Identity 28% Template c3op1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrolide-efflux protein; PDBTitle: crystal structure of macrolide-efflux protein sp_1110 from2 streptococcus pneumoniae Resolution 2.49 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.						390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																	.	.	.																				.	.	.	.	.
Query SS confidence																																	.	.	.																				.	.	.	.	.
Query Sequence		E	K	V	V	M	T	N	G	V	F	D	I	L	H	A	G	H	V	S	Y	L	A	N	A	R	K	L	G	D	R	L	.	.	.	I	V	A	V	N	S	D	A	S	T	K	R	L	K	G	D	S	R	P	.	.	.	.	.	V	N	P	L	E	Q	R	M	I	V	L	G	A	L	E	A	V	D	W	V	V	S
Query Conservation																																	.	.	.																				.	.	.	.	.
Alig confidence																																	.	.	.																				.	.	.	.	.																.
Template Conservation																																																																											.
Template Sequence		S	D	S	V	V	V	L	G	Y	F	D	G	I	H	K	G	H	Q	E	L	F	R	V	A	N	K	A	A	R	K	D	L	L	P	I	V	V	X	T	F	N	E	S	P	K	I	A	L	E	P	Y	H	P	D	L	F	L	H	I	L	N	P	A	E	R	E	R	K	L	K	R	E	G	.	V	E	E	L	Y	L
Template Known Secondary structure		S							S			S	S																S	S	T	T										S	S		T					S				G	G	G	G		B	S	S													T	.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.
								412	.	.	.	.	.	.	.	420	.	.	.	.					.	.	.	.	.	430	.	.	.	.	.	.			.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.					.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.														.	.	.	.													.	.																										.	.	.	.
Query SS confidence		.	.	.	.	.	.														.	.	.	.													.	.																										.	.	.	.
Query Sequence		.	.	.	.	.	.	F	E	E	D	T	P	Q	R	L	I	A	G	I	.	.	.	.	L	P	D	L	L	V	K	G	G	D	Y	K	.	.	P	E	E	I	A	G	S	K	E	V	W	A	N	G	G	E	V	L	V	L	N	F	E	D	G	.	.	.	.	C	S	T	T	N	I	I	K	K	I	Q	Q	D	K
Query Conservation		.	.	.	.	.	.														.	.	.	.													.	.																										.	.	.	.
Alig confidence		.	.	.	.	.	.														.	.	.	.													.	.																										.	.	.	.
Template Conservation
Template Sequence		L	D	F	S	S	Q	F	A	S	L	T	A	Q	E	F	F	A	T	Y	I	K	A	X	N	A	K	I	I	V	A	G	F	D	Y	T	F	G	S	D	K	K	T	A	E	D	L	K	N	Y	F	D	G	E	V	I	I	V	P	P	V	E	D	E	K	G	K	I	S	S	T	R	I	R	Q	A	I	L	D	G	N
Template Known Secondary structure										T															T								T	T			B	T	T	T	T	B		S	T	T						S	S									B		S	S		B													T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions