Return to main results Retrieve Phyre Job Id

Job DescriptionP76658
Confidence99.75%DateThu Jan 5 12:25:18 GMT 2012
Rank56Aligned Residues171
% Identity18%Templatec3mbjA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative phosphomethylpyrimidine kinase; PDBTitle: crystal structure of a putative phosphomethylpyrimidine kinase2 (bt_4458) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a3 resolution (rhombohedral form)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.. .......160.........170.........180... ......
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Query Sequence  GVDPQPLHERINQALSSIGALVLSDY. AKGALASVQQMIQLARKAGVPVLIDPKGTDF. . . . . . . . . . . . . . . . ERYRGA
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Template Sequence  TDEXPKIIAEWKKLEVQFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDXEXVKEXRHLITKA
Template Known Secondary structure  TTTT


S



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TT




TT
TT

TT
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   60.........70.........80.........90.........100.........110.........120.........130.........
 
   190.........200........ .210.........220.........230.. .......240.........250.........260..
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Query Sequence  TLLTPNLSEFEAVVGKCKT. . . EEEIVERGMKLIADYELSALLVTR. . . . SEQGMSLLQPGKAPLHMPTQAQEVYDVTGA
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Template Sequence  DVITPNLTELFYLLDEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHHKTSVYAYNRQGNRYWKVTCPYLPAHYPGT
Template Known Secondary structure  S

BT



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TTS
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TTTT

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TT
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   140.........150.........160.........170.........180.........190.........200.........210.........
 
   263......270.........280.........290.......
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Query Sequence  GDTVIGVLAATLAAGNSLEEACFFANAAAGVVVGK
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Template Sequence  GDTFTSVITGSLXQGDSLPXALDRATQFILQGIRA
Template Known Secondary structure  TT

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   223......230.........240.........250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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