Job Description P76658 Confidence 100.00% Date Thu Jan 5 12:25:18 GMT 2012 Rank 38 Aligned Residues 275 % Identity 18% Template c3kd6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, pfkb family; PDBTitle: crystal structure of nucleoside kinase from chlorobium tepidum in2 complex with amp Resolution 1.88 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																												.													.
Query SS confidence																																												.													.
Query Sequence		V	M	V	V	G	D	V	M	L	D	R	Y	W	Y	G	P	T	S	R	I	S	P	E	A	P	V	P	V	V	K	V	N	T	I	E	E	R	P	G	G	A	A	.	N	V	A	M	N	I	A	S	L	G	A	N	.	A	R	L	V	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S	L	A	D	V	N
Query Conservation																																												.													.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.													.											.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		L	L	V	I	G	S	L	A	F	D	D	I	E	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	R	S	D	N	T	L	G	G	S	S	T	Y	I	A	L	S	A	S	Y	F	T	D	E	P	I	R	X	V	G	V	V	G	S	D	.	F	G	K	E	H	F	D	L	L	H	A	K	N
Template Known Secondary structure						S										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																			T	T	T		S	S										T	T	.	S											T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.																.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.
		91	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	K	C	D	F	V	S	V	.	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	E	G	F	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L	S	D	Y	A	K	G	A	L	A	S	V	Q	Q	M	I	Q	L	A	R	K
Query Conservation										.
Alig confidence										.																																					.	.	.																		.	.	.
Template Conservation																																															.	.	.																		.	.	.
Template Sequence		I	D	T	R	G	I	Q	V	I	E	D	G	K	T	F	R	W	A	G	R	Y	H	Y	D	X	N	T	R	D	T	L	D	T	Q	L	N	V	F	A	E	F	D	P	H	V	.	.	.	P	Q	Y	Y	R	D	S	K	F	V	C	L	G	N	I	D	P	.	.	.	E	L	Q	L	K	V	L	D	Q	I	D	D
Template Known Secondary structure											T	T												T	T	S	S										G	G	G	T	T						.	.	.		G	G	G	T	T		S						S	S			.	.	.								T	T		S	S
Template Predicted Secondary structure																																															.	.	.																		.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140
		170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		A	G	V	P	V	L	I	D	P	K	G	T	.	.	.	.	.	.	.	D	F	E	R	Y	R	G	A	T	L	L	T	P	N	L	S	E	F	E	A	V	V	G	K	C	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L	S	A	L	L	V	T	R	S	E	Q	G	M	S	L	L	Q	P
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		P	K	L	V	V	C	D	T	X	N	F	W	I	E	G	K	P	E	E	L	K	K	V	L	A	R	V	D	V	F	I	V	N	D	S	E	A	R	L	L	S	G	D	P	N	.	.	.	.	.	L	V	K	T	A	R	I	I	R	E	X	G	P	K	T	L	I	I	K	K	G	E	H	G	A	L	L	F	T	D
Template Known Secondary structure			S																							T	T		S														S		S		.	.	.	.	.										T	T	S		S							T	T	S							T
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.																					.	.	.
Query SS confidence																																								.	.	.	.	.																					.	.	.
Query Sequence		G	K	A	P	L	H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	A	G	N	S	L	.	.	.	.	.	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K	L	G	T	.	.	.	S	T	V	S	P	I	E	L	E	N	A	V	R	G
Query Conservation																																								.	.	.	.	.																					.	.	.
Alig confidence																																								.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		N	G	I	F	A	A	P	A	F	P	L	E	S	I	Y	D	P	T	G	A	G	D	T	F	A	G	G	F	I	G	H	L	A	R	C	G	N	T	S	E	A	E	X	R	K	A	V	L	Y	G	S	A	X	A	S	F	C	V	E	Q	F	G	P	Y	R	Y	N	D	L	D	L	L	E	V	D	D	R	Y	Q	S
Template Known Secondary structure		T									T	T				S			T	T																				S																			T	T	S	S	T	T	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions