Job Description P76658 Confidence 98.44% Date Thu Jan 5 12:25:18 GMT 2012 Rank 101 Aligned Residues 137 % Identity 17% Template c3k5wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: crystal structure of a carbohydrate kinase (yjef family)from2 helicobacter pylori Resolution 2.60 Å

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		172	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure									.	.	.	.																										.	.	.	.	.
Query SS confidence									.	.	.	.																										.	.	.	.	.
Query Sequence		V	P	V	L	I	D	P	.	.	.	.	K	G	T	D	F	E	R	Y	R	G	A	T	L	L	T	P	N	L	S	E	F	E	A	V	V	.	.	.	.	.	G	K	C	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L	S	A	L	L	V	T	R	S	E	Q	G	M	S	L	L	Q	P
Query Conservation									.	.	.	.																										.	.	.	.	.
Alig confidence									.	.	.	.																										.	.	.	.	.																																.	.	.
Template Conservation																																																																										.	.	.
Template Sequence		A	P	C	V	L	D	A	G	V	F	Y	H	K	E	I	L	Q	A	L	E	K	E	A	V	L	T	P	H	P	K	E	F	L	S	L	L	N	L	V	G	I	N	I	S	X	L	E	L	L	D	N	K	L	A	R	D	F	S	Q	K	Y	P	K	V	V	L	L	L	K	G	A	N	.	.	.	T	L	I	A	H
Template Known Secondary structure		S						G	G	G	G	G	S	G	G	G	G	T	T	T	T	S	S																	T	S					T	T	S	G	G	G	S											T	T							S	S	S	.	.	.
Template Predicted Secondary structure																																																																										.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		G	K	A	P	L	H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	A	G	N	S	L	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K	L	G	.	T	S	T	V	S	P	I	E	L	E	N	A	V
Query Conservation																																																											.
Alig confidence										.																																																	.
Template Conservation										.
Template Sequence		Q	G	Q	V	F	I	N	I	.	L	G	S	V	A	L	A	K	A	G	S	G	D	V	L	A	G	L	I	L	S	L	L	S	Q	N	Y	T	P	L	D	A	A	I	N	A	S	L	A	H	A	L	A	S	L	E	F	K	N	N	Y	A	L	T	P	L	D	L	I	E	K	I
Template Known Secondary structure		T	T							.				G	G	G		S	T	T															T	T																	G	G	G	G		S	S	T	T
Template Predicted Secondary structure										.
Template SS confidence
		394	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions