Job Description P76658 Confidence 99.65% Date Thu Jan 5 12:25:18 GMT 2012 Rank 60 Aligned Residues 215 % Identity 16% Template c3ibqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyridoxal kinase; PDBTitle: crystal structure of pyridoxal kinase from lactobacillus2 plantarum in complex with atp Resolution 2.00 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S	L	A	D	V	N	V	K	C	D	F	V	S	V	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	E	G	F	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L
Query Conservation
Alig confidence											.																				.	.	.	.	.	.	.	.	.	.
Template Conservation											.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	A	V	G	G	I	S	L	.	S	S	A	L	P	V	L	T	A	X	Q	Y	D	V	A	A	L	P	T	.	.	.	.	.	.	.	.	.	.	S	L	L	S	T	H	T	S	G	Y	G	T	P	A	V	V	D	L	S	T	W	L	P	Q	V	F	A	H	W	T	R	A	Q	L	H	F	D	Q	A	L	I
Template Known Secondary structure						S	S				.										T	T									.	.	.	.	.	.	.	.	.	.							S	S	S	S	S	S							T	T												T	T				S
Template Predicted Secondary structure											.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.																	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	Y	A	K	G	A	L	A	S	V	Q	Q	M	I	Q	L	A	R	K	A	.	G	V	P	V	L	I	D	P	K	G	T	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Y	R	G	A	T	L	L	T	P	N	L	S	E	F	E	A	V	V	G	K	C	K	T	E	E	E	I
Query Conservation																							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.			.																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.			.
Template Sequence		.	G	Y	.	V	G	S	V	A	L	C	Q	Q	I	T	T	Y	L	E	Q	Q	T	L	S	L	L	V	V	D	P	V	L	G	D	L	G	Q	L	Y	Q	G	F	D	Q	D	Y	V	A	A	X	R	Q	L	I	Q	Q	A	D	V	I	L	P	N	T	T	E	A	A	L	L	T	G	A	P	Y	Q	V	T	P	D
Template Known Secondary structure		.			.																	S			S											T	T				T	T														T	T		S														T					S	S
Template Predicted Secondary structure		.			.
Template SS confidence
			79	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure													.	.														.	.	.
Query SS confidence													.	.														.	.	.
Query Sequence		V	E	R	G	M	K	L	I	A	D	Y	.	.	E	L	S	A	L	L	V	T	R	S	E	Q	G	.	.	.	M	S	L	L	Q	P	G	K	A	P	L	H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	A	G	N	S	L	E	E	A	C	F	F	A
Query Conservation													.	.														.	.	.
Alig confidence													.	.														.	.	.
Template Conservation
Template Sequence		L	E	V	I	L	P	A	L	Q	A	Q	L	K	T	G	A	H	A	V	I	T	D	V	Q	R	A	D	Q	I	G	C	A	W	L	D	E	A	G	H	V	Q	Y	C	G	A	R	R	L	P	G	H	Y	N	G	T	G	D	T	L	A	A	V	I	A	G	L	L	G	R	G	Y	P	L	A	P	T	L	A	R	A
Template Known Secondary structure											T	T	S		T	T											T	T									T	T	S											S	S			S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	A	A	G	V	V	V	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	W	L	N	X	A	V	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions