Job Description P76658 Confidence 99.31% Date Thu Jan 5 12:25:18 GMT 2012 Rank 76 Aligned Residues 121 % Identity 18% Template c3h05A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein vpa0413; PDBTitle: the crystal structure of a putative nicotinate-nucleotide2 adenylyltransferase from vibrio parahaemolyticus Resolution 1.65 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.										.	.	.	.	.	.	.	410
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	V	V	M	T	N	G	V	F	D	I	L	H	A	G	H	V	S	Y	L	A	N	A	R	K	L	G	D	R	L	I	V	A	V	N	S	D	A	S	T	K	R	L	K	G	D	S	R	P	V	N	P	L	E	Q	R	M	I	V	L	G	A	.	.	.	.	.	.	.	.	.	L	E	A	V	D	W	V	V
Query Conservation																																																																	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	I	A	I	F	G	S	A	F	N	P	P	S	L	G	H	K	S	V	I	E	S	L	S	H	F	D	L	V	L	L	E	P	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	D	Y	P	I	R	C	K	L	V	D	A	F	I	K	D	M	G	L	S	N	V	Q	R	S	D	L	E	Q
Template Known Secondary structure												S	S										T	T		T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.															.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.							.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.									.	.
Query SS confidence																			.	.	.	.	.	.									.	.
Query Sequence		S	F	E	E	D	T	P	Q	R	L	I	A	G	I	L	P	D	.	.	.	.	.	.	L	L	V	K	G	G	D	Y	.	.	K	P	E	E	I	A	G	S	K	E	V	W	A	N	G	G	E	V	L	V	L	N	F	E	D	G	C	S	T	T	N	I	I	K	K	I	Q	Q	D	K
Query Conservation																			.	.	.	.	.	.									.	.
Alig confidence																			.	.	.	.	.	.									.	.																.
Template Conservation																																																		.
Template Sequence		A	L	Y	S	V	T	T	Y	A	L	L	E	K	I	Q	E	I	Y	P	T	A	D	I	T	F	V	I	G	P	D	N	F	F	K	F	A	K	F	Y	K	A	E	E	I	T	E	R	W	.	T	V	M	A	C	P	E	K	V	K	I	R	S	T	D	I	R	N	A	L	I	E	G	K
Template Known Secondary structure																			S	T	T	S													T	G	G	G	S	T	T								S	.								S	S														T
Template Predicted Secondary structure																																																		.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions