Job Description P76658 Confidence 100.00% Date Thu Jan 5 12:25:18 GMT 2012 Rank 35 Aligned Residues 290 % Identity 20% Template c3gbuD_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized sugar kinase ph1459; PDBTitle: crystal structure of an uncharacterized sugar kinase ph1459 from2 pyrococcus horikoshii in complex with atp Resolution 2.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		V	M	V	V	G	D	V	M	L	D	R	Y	W	Y	G	P	T	S	R	I	S	P	E	A	P	V	P	V	V	K	V	N	T	I	E	E	R	P	G	G	A	A	.	N	V	A	M	N	I	A	S	L	G	A	N	A	R	L	V	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S	L	A	D	V	N	V
Query Conservation																																												.
Alig confidence														.	.	.	.	.	.	.	.	.																						.
Template Conservation														.	.	.	.	.	.	.	.	.
Template Sequence		I	A	S	I	G	E	L	L	I	D	L	I	.	.	.	.	.	.	.	.	.	S	V	E	E	G	D	L	K	D	V	R	L	F	E	K	H	P	G	G	A	P	A	N	V	A	V	G	V	S	R	L	G	V	K	S	S	L	I	S	K	V	G	N	D	P	F	G	E	Y	L	I	E	E	L	S	K	E	N	V
Template Known Secondary structure						S								.	.	.	.	.	.	.	.	.		S	S	S	S		T	T	T																						T	T											S	S													T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.										.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		92	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																																								.	.
Query SS confidence									.																																																								.	.
Query Sequence		K	C	D	F	V	S	V	.	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	E	G	F	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L	S	D	Y	A	.	.	K	G	A	L	A	S	V	Q	Q	M	I	Q	L	A	R
Query Conservation									.																																																								.	.
Alig confidence									.																																					.	.	.																	.	.
Template Conservation																																														.	.	.
Template Sequence		D	T	R	G	I	V	K	D	E	K	K	H	T	G	I	V	F	V	Q	L	K	G	A	S	P	S	F	L	L	Y	D	D	V	A	Y	F	N	X	T	L	N	D	I	N	.	.	.	W	D	I	V	E	E	A	K	I	V	N	F	G	S	V	I	L	A	R	N	P	S	R	E	T	V	X	K	V	I	K	K	I
Template Known Secondary structure		B		T	T					S	S	S											S	S	S								S	S	G	G	G				G	G	G			.	.	.								S						S	G	G	G	G	S	T	T
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		K	A	G	V	P	V	L	I	D	P	K	G	T	D	F	E	R	Y	R	G	A	T	L	L	T	P	N	L	S	E	F	E	A	V	V	G	K	C	.	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L	S	A	L	L	V	T	R	S	E	Q	G	M	S	L	L	Q	P	G	K	A	P	L
Query Conservation																																								.
Alig confidence																																								.																																				.
Template Conservation																																																																												.
Template Sequence		K	G	S	S	L	I	A	F	D	V	N	L	R	L	D	L	W	R	G	Q	E	E	E	X	I	K	V	L	E	E	S	I	K	L	A	D	I	V	K	A	S	E	E	E	V	L	Y	L	E	N	Q	G	V	E	V	K	G	S	X	L	T	A	I	T	L	G	P	K	G	F	R	L	I	K	.	N	E	T	V	V
Template Known Secondary structure		B	T	T	B										G	G	G	G	T	T														T	T		S														T	T	T						S	S							G	G	G							.	T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																														.	.																									.
Query SS confidence																														.	.																									.
Query Sequence		H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	.	.	A	G	N	S	L	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K	L	G	.	T	S	T	V	S	P	I	E	L	E	N	A	V	R	G	R
Query Conservation																														.	.																									.
Alig confidence																														.	.																									.
Template Conservation
Template Sequence		D	V	P	S	Y	N	V	N	P	L	D	T	T	G	A	G	D	A	F	X	A	A	L	L	V	G	I	L	K	L	K	G	L	D	L	L	K	L	G	K	F	A	N	L	V	A	A	L	S	T	Q	K	R	G	A	W	S	T	P	R	K	D	E	L	L	K	Y	K	E	A	R
Template Known Secondary structure											S			T	T																S	S	S																		T	T	S		S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions