Job Description P76658 Confidence 98.24% Date Thu Jan 5 12:25:18 GMT 2012 Rank 108 Aligned Residues 231 % Identity 18% Template c3drwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adp-specific phosphofructokinase; PDBTitle: crystal structure of a phosphofructokinase from pyrococcus2 horikoshii ot3 with amp Resolution 1.90 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	E	E	R	P	G	G	A	A	N	V	A	M	N	I	A	S	L	G	A	N	A	R	L	V	.	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	N	V	K	C	D	F	V	S	V	P	T	H	P	T
Query Conservation																												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	E	R	L	G	G	Q	A	G	I	I	A	N	T	L	A	G	L	K	I	R	K	V	I	A	Y	T	P	F	L	P	K	R	L	A	E	L	F	K	K	G	V	L	Y	P	V	V	E	N	G	E	L	Q	F	K	P	I	Q	E	A	Y	R	E	G	D	P	L	K	I	N	R	I	F	E	F	R	K	G	L
Template Known Secondary structure		S						S												T	T		S							S								T	T	S		T	T							S	S	S	S						G	G	G				T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		104	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.													.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure					.	.	.																	.				.																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																	.				.																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	K	.	.	.	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	.	E	G	F	.	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L	S	D	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	K	G	A	L	A	S	V	Q	Q	M	I	Q	L
Query Conservation					.	.	.																	.				.																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																	.				.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	K	L	G	D	E	T	I	E	I	P	N	S	G	R	F	I	V	S	A	R	F	E	S	I	S	R	I	E	T	R	E	D	I	K	P	F	L	G	E	I	G	K	E	V	D	G	A	I	F	S	G	Y	Q	G	L	R	T	K	Y	S	D	G	K	D	A	N	Y	Y	L	R	R	A	K	E	D	I	I	E
Template Known Secondary structure					S	S	S							S											S	G	G	G			S			T	T	T	G	G	G									S							G	G	G			S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.													.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	K	A	G	V	P	V	L	I	D	P	K	G	T	D	F	E	R	.	.	.	.	.	.	.	.	.	Y	R	G	A	T	L	L	T	P	N	L	S	E	F	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	V	G	K	C	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L
Query Conservation																					.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	E	K	D	V	K	I	H	V	E	F	A	S	V	Q	D	R	K	L	R	K	K	I	I	T	N	I	L	P	F	V	D	S	V	G	I	D	E	A	E	I	A	Q	I	L	S	V	L	G	Y	R	E	L	A	D	R	I	F	T	Y	N	R	L	E	D	S	I	L	G	G	M	I	I	L	D	E	L	N	F
Template Known Secondary structure					T	T											S												T	G	G	G	S	S																	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	L	L	V	T	R	S	E	Q	G	M	S	L	L	Q	P	G	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	L	Q	V	H	T	T	Y	Y	L	M	Y	I	T	H	R	D	N	P	L	S	E	E	E	L	A	K	S	L	E	F	G	T	T	L	A	A	A	R	A	S	L	G	D	I	R	G	P	D	D	Y	K	V	G	L	K	V	P	F	N	E	R	S	E	Y	V	K	L	R	F	E	E	A	K	S	R	L	R	M
Template Known Secondary structure		S							S	S								T	T		S	S																							S	S			S	G	G	G						T	S				T	T															S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
						246	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure		.	.	.	.											.
Query SS confidence		.	.	.	.											.
Query Sequence		.	.	.	.	P	L	H	M	P	T	Q	A	Q	E	.	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A
Query Conservation		.	.	.	.											.
Alig confidence		.	.	.	.											.
Template Conservation
Template Sequence		R	E	Y	K	V	V	V	I	P	T	R	L	V	Q	N	P	V	L	T	V	G	L	G	D	T	I	S	A	G	A	F	L	T	Y	L
Template Known Secondary structure		T	T												S	S		S			T	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions