 |
Job Description | P76658 | Confidence | 99.61% | Date | Thu Jan 5 12:25:18 GMT 2012 |
Rank | 61 | Aligned Residues | 114 |
% Identity | 20% | Template | c3do8B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phosphopantetheine adenylyltransferase; |
PDBTitle: the crystal structure of the protein with unknown function2 from archaeoglobus fulgidus
|
Resolution | 1.60 Å |
|
 |
  |   |
343 | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | |
. | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | |
|
|
. | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | T | N | G | V | F | D | I | L | H | A | G | H | V | S | Y | L | A | N | A | R | K | L | G | . |
D | R | L | I | V | A | V | N | S | D | A | S | T | K | R | L | K | G | D | S | R | P | V | N | P | L | E | Q | R | M | I | V | L | G | A | L | . |
. |
. |
E | A | V | D | W | V | V | S | F | E | E | D | T | P | Q |
Query Conservation |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
| . |
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   | . | . | . |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
Template Sequence |   |
V | A | L | G | G | T | F | E | P | L | H | E | G | H | K | K | L | I | D | V | A | I | K | L | G | G | R | D | I | T | I | G | V | T | S | D | R | M | A | R | A | R | I | . |
. |
. |
R | S | V | L | P | F | A | I | R | A | E | N | V | K | R | Y | V | M | R | K | Y | G | F | E | P | E | I | V | K | I | T | N | P | Y |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  |  |
|  |  |  |  |  |  |  | S | . | . | . |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |
| S | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
419 | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | |
|
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | I | A | G | I | L | P | D | L | L | V | K | G | G | D | Y | K | P | E | E | I | A | G | S | K | E | V | W | A | N | G | G | . |
. |
. |
E | V | L | V | L | N | F | E |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|   |   |
|   |
|
|   |
|   |   |
|
Template Sequence |   |
G | K | T | L | D | V | D | F | E | Y | L | V | V | S | P | E | T | Y | E | M | A | L | K | I | N | Q | K | R | E | E | L | G | K | R | K | I | T | I | V | K | V | D | W | M |
Template Known Secondary structure |   |
T | T | T | T | T | S |
|
| S |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|