Job Description P76658 Confidence 37.42% Date Thu Jan 5 12:25:18 GMT 2012 Rank 181 Aligned Residues 78 % Identity 26% Template c3crqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel Resolution 2.20 Å

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		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.											.	.	300	.	.	.	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	A	G	N	S	L	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K	.	.	.	.	.	.	.	.	.	.	L	G	T	S	T	V	S	P	I	E	L	E	.	.	.	N	A	V	R	G	R	A	D	T	G	F	G	V
Query Conservation																																												.	.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	G	P	T	A	A	G	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	A	M	A	L	A	D	A	L	P	C	E	L	I	S	V	D	S	A	L	I	Y	R	G	M	D	I	G	T	A	K	P	S	R	E	L	L	A	R	Y	P	H	R	L	I	D	I	R	D	P	A	E	S	Y
Template Known Secondary structure					S	T	T	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S									T	T	T	T	B	T	T			T	T	T	T										S				S	S	S		B		T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.																20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		323	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		M	T	E	E	.	.	.	E	L	K	L	A	V	A	A	A	R	K	R	G	E	K	V	V	M	T	N	G	V
Query Conservation						.	.	.
Alig confidence						.	.	.
Template Conservation
Template Sequence		S	A	A	E	F	R	A	D	A	L	A	A	M	A	K	A	T	A	R	G	R	I	P	L	L	V	G	G	T
Template Known Secondary structure																				T	T								S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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