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Job Description | P76658 | Confidence | 54.52% | Date | Thu Jan 5 12:25:18 GMT 2012 |
Rank | 145 | Aligned Residues | 102 |
% Identity | 18% | Template | c3a05A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:tryptophanyl-trna synthetase; |
PDBTitle: crystal structure of tryptophanyl-trna synthetase from2 hyperthermophilic archaeon, aeropyrum pernix k1 complex3 with tryptophan
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Resolution | 2.20 Å |
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295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | |
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. | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
V | G | K | L | G | T | S | T | V | S | P | I | E | L | E | N | A | V | R | G | R | A | D | T | . |
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G | F | G | V | M | T | E | E | E | L | K | L | A | V | A | A | A | R | K | R | G | E | K | V | V | M | T | N | G | V | F | D | I | . |
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L | H | A | G | H | V | S | Y | L | A | N | A | R | K | L | . |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | R | T | F | G | I | R | P | F | S | E | V | L | P | L | L | R | K | A | G | M | E | P | S | F | L | M | R | R | G | I | I | F | G | H | R | D | F | D | K | I | L | E | A | K | A | R | G | E | R | V | A | V | L | T | . |
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F | M | P | S | G | K | F | H | F | G | H | K | L | T | V | D | Q | L | I | Y | L | Q |
Template Known Secondary structure |   |
G | G | G | G | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
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367 | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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G | D | R | L | I | V | A | V | N | S | D | A | S | T | K | R | L | K | G | D | S | R | P | V | N | P | L | E | Q | R | M | I | V | L | G | A | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | N | G | F | K | V | F | V | A | I | A | D | A | E | A | F | A | . |
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V | R | R | I | G | R | E | E | A | V | R | I | A | V | E | E | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
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. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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