Job Description P76658 Confidence 100.00% Date Thu Jan 5 12:25:18 GMT 2012 Rank 27 Aligned Residues 286 % Identity 15% Template c2varB_ PDB info PDB header:transferase Chain: B: PDB Molecule:fructokinase; PDBTitle: crystal structure of sulfolobus solfataricus 2-keto-3-2 deoxygluconate kinase complexed with 2-keto-3-3 deoxygluconate Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		G	V	M	V	V	G	D	V	M	L	D	R	Y	W	Y	G	P	T	S	R	I	S	P	E	A	P	V	P	V	V	K	V	N	T	I	E	E	R	P	G	G	A	A	.	N	V	A	M	N	I	A	S	L	G	A	N	A	R	L	V	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S	L	A	D	V	N
Query Conservation																																													.
Alig confidence															.	.	.	.	.	.	.	.	.																						.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		D	V	I	A	L	G	E	P	L	I	Q	F	N	.	.	.	.	.	.	.	.	.	S	F	N	P	G	P	L	R	F	V	N	Y	F	E	K	H	V	A	G	S	E	L	N	F	C	I	A	V	V	R	N	H	L	S	C	S	L	I	A	R	V	G	N	D	E	F	G	K	N	I	I	E	Y	S	R	A	Q	G
Template Known Secondary structure															.	.	.	.	.	.	.	.	.		S	S	S	S		G	G	G																						T	T											S	S													T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.										.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		91	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.
Predicted Secondary structure										.																.	.	.	.																																											.	.	.	.
Query SS confidence										.																.	.	.	.																																											.	.	.	.
Query Sequence		V	K	C	D	F	V	S	V	.	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	.	.	.	.	Q	Q	L	I	R	L	D	F	E	E	G	F	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L	S	D	Y	A	K	G	.	.	.	.	A	L	A	S	V	Q
Query Conservation										.																.	.	.	.																																											.	.	.	.
Alig confidence										.																.	.	.	.																						.	.	.																			.	.	.	.
Template Conservation																																																			.	.	.
Template Sequence		I	D	T	S	H	I	K	V	D	N	E	S	F	T	G	I	Y	F	I	Q	R	G	Y	P	I	P	M	K	S	E	L	V	Y	Y	R	K	G	S	A	G	S	R	L	S	P	E	D	I	N	.	.	.	E	N	Y	V	R	N	S	R	L	V	H	S	T	G	I	T	L	A	I	S	D	N	A	K	E	A	V	I
Template Known Secondary structure			B		T	T					T	T	S										S	S	S	S	T	T									T	T		S	G	G	G			G	G	G			.	.	.						T	S	S
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.												.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	M	I	Q	L	A	R	K	A	G	V	P	V	L	I	D	P	K	G	T	D	F	E	R	.	.	.	.	.	.	.	.	.	.	.	Y	R	G	A	T	L	L	T	P	N	L	S	E	F	E	A	V	V	G	K	C	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L	S	A	L	L	V
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																																																											.	.	.	.	.
Template Sequence		K	A	F	E	L	A	K	S	R	S	L	D	T	N	I	R	P	K	L	W	S	S	L	E	K	A	K	E	T	I	L	S	I	L	K	K	Y	D	I	E	V	L	I	T	D	P	D	D	T	K	I	L	L	D	V	T	D	.	.	.	.	.	P	D	E	A	Y	R	K	Y	K	E	L	G	V	K	V	L	L	Y
Template Known Secondary structure								S	S									G	G	G	S	S																S																	S				.	.	.	.	.											T	T
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		T	R	S	E	Q	G	M	S	L	L	Q	P	G	K	A	P	L	H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	A	G	N	S	L	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K	L	G	T	S	T	.	.	V	S	P	I	E	L
Query Conservation																																																																										.	.
Alig confidence													.																																																													.	.
Template Conservation													.
Template Sequence		K	L	G	S	K	G	A	I	A	Y	K	.	D	N	V	K	A	F	K	D	A	Y	K	V	P	V	E	D	P	T	G	A	G	D	A	M	A	G	T	F	V	S	L	Y	L	Q	G	K	D	I	E	Y	S	L	A	H	G	I	A	A	S	T	L	V	I	T	V	R	G	D	N	E	L	T	P	T	L	E	D	A
Template Known Secondary structure				G	G	G							.	T	T													S			T	T															T	T																		T	T	S	S	S	S	S	T	T
Template Predicted Secondary structure													.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		309	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	V	R	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	F	L	N	E	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions