Job Description P76658 Confidence 100.00% Date Thu Jan 5 12:25:18 GMT 2012 Rank 4 Aligned Residues 296 % Identity 16% Template c2qcvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative 5-dehydro-2-deoxygluconokinase; PDBTitle: crystal structure of a putative 5-dehydro-2-deoxygluconokinase (iolc)2 from bacillus halodurans c-125 at 1.90 a resolution Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		E	R	A	G	V	M	V	V	G	D	V	M	L	D	R	Y	W	Y	G	P	T	S	R	I	S	P	E	A	P	V	P	V	V	K	V	N	T	I	E	E	R	P	G	G	A	A	.	N	V	A	M	N	I	A	S	L	G	A	N	A	R	L	V	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S	L	A
Query Conservation																																																.
Alig confidence																			.	.	.	.	.	.	.	.																						.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		R	E	F	D	L	I	A	I	G	R	A	C	I	D	L	N	A	.	.	.	.	.	.	.	.	V	E	Y	N	R	P	X	E	E	T	X	T	F	S	K	Y	V	G	G	S	P	A	N	I	V	I	G	S	S	K	L	G	L	K	A	G	F	I	G	K	I	A	D	D	Q	H	G	R	F	I	E	S	Y	X	R
Template Known Secondary structure			S							S									.	.	.	.	.	.	.	.	S	S		S	S		G	G	G										S												T	T											S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure													.																																																								.	.	.
Query SS confidence													.																																																								.	.	.
Query Sequence		D	V	N	V	K	C	D	F	V	S	V	.	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	E	G	F	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L	S	D	Y	A	.	.	.	K	G	A	L	A	S	V	Q	Q	M
Query Conservation													.																																																								.	.	.
Alig confidence													.																																																								.	.	.
Template Conservation
Template Sequence		G	V	G	V	D	T	S	N	L	V	V	D	Q	E	G	H	K	T	G	L	A	F	T	E	I	K	S	P	E	E	C	S	I	L	X	Y	R	Q	D	V	A	D	L	Y	L	S	P	E	E	V	N	E	A	Y	I	R	R	S	K	L	L	L	V	S	G	T	A	L	S	K	S	P	S	R	E	A	V	L	K	A
Template Known Secondary structure			T	T		B		T	T					S	S														T	T									T	T		G	G	G	G			G	G	G							T	T								G	G	G	G	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.														.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	L	A	R	K	A	G	V	P	V	L	I	D	P	K	G	T	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Y	R	G	A	T	L	L	T	P	N	L	S	E	F	E	A	V	V	G	K	C	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L	S	A	L	L	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																																																														.	.
Template Sequence		I	R	L	A	K	R	N	D	V	K	V	V	F	E	L	D	Y	R	P	Y	S	W	E	T	P	E	E	T	A	V	Y	Y	S	L	V	A	E	Q	S	D	I	V	I	G	T	R	E	E	F	D	V	L	E	N	R	T	E	K	G	D	.	.	N	D	E	T	I	R	Y	L	F	K	H	S	P	E	L	I	V	I
Template Known Secondary structure								T	T											G	G	G	S	S																	S													T	T		S	S				.	.									T	T	S	S		S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	S	E	Q	G	M	S	L	L	Q	P	G	K	A	P	L	H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	A	G	N	S	L	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K	L	G	T	S	T	V	S	P	I	E	L	E	N
Query Conservation
Alig confidence																																																																					.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		K	H	G	V	E	G	S	F	A	Y	T	K	A	G	E	A	Y	R	G	Y	A	Y	K	T	K	V	L	K	T	F	G	A	G	D	S	Y	A	S	A	F	L	Y	A	L	I	S	G	K	G	I	E	T	A	L	K	Y	G	S	A	S	A	S	I	V	V	S	K	.	.	.	A	X	P	S	V	E	E	I	E	A
Template Known Secondary structure				G	G	G							T	T	S								B					S			T	T															T	T																					.	.	.
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.
		311	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	R	G	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	E	K	D	E	T
Template Known Secondary structure						T		B
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions