Job Description P76658 Confidence 99.75% Date Thu Jan 5 12:25:18 GMT 2012 Rank 55 Aligned Residues 209 % Identity 19% Template c2i5bC_ PDB info PDB header:transferase Chain: C: PDB Molecule:phosphomethylpyrimidine kinase; PDBTitle: the crystal structure of an adp complex of bacillus2 subtilis pyridoxal kinase provides evidence for the3 parralel emergence of enzyme activity during evolution Resolution 2.80 Å

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		51	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		G	G	A	A	N	V	A	.	.	M	N	I	A	S	L	G	A	N	A	R	L	V	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S	L	A	D	V	N	V	K	C	D	F	V	S	V	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	E	G	F	E	G	V
Query Conservation									.	.
Alig confidence									.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	A	G	I	Q	A	D	L	K	T	F	Q	E	K	N	V	Y	G	M	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	I	V	A	M	D	P	N	N	S	W	N	H	Q	V	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I
Template Known Secondary structure		S	S	S												T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																		.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																	.	.	.	.	.	.	190	.
Predicted Secondary structure																			.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	.	A	L	V	L	S	D	Y	A	K	G	A	L	A	S	V	Q	Q	M	I	Q	L	A	R	K	A	G	V	P	V	L	I	D	P	K	G	T	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Y	R	G	A	T	L
Query Conservation																			.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	D	T	I	R	A	Q	L	A	T	I	T	D	G	I	G	V	D	A	M	K	T	G	M	L	P	T	V	D	I	I	E	L	A	A	K	T	I	K	E	K	Q	L	K	N	V	V	I	D	P	V	M	V	C	K	G	A	N	E	V	L	Y	P	E	H	A	Q	A	L	R	E	Q	L	A	P	L	A	T	V
Template Known Secondary structure															T	T	S			S									S														T	T		S	S								S	S	B		S	S	S	B	S												T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure															.																																		.	.	.	.	.
Query SS confidence															.																																		.	.	.	.	.
Query Sequence		L	T	P	N	L	S	E	F	E	A	V	V	G	.	K	C	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L	S	A	L	L	V	T	R	S	E	Q	G	M	.	.	.	.	.	S	L	L	Q	P	G	K	A	P	L	H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T
Query Conservation															.																																		.	.	.	.	.
Alig confidence															.																																		.	.	.	.	.
Template Conservation
Template Sequence		I	T	P	N	L	F	E	A	S	Q	L	S	G	M	D	E	L	K	T	V	D	D	M	I	E	A	A	K	K	I	H	A	L	G	A	Q	Y	V	V	I	T	G	G	G	K	L	K	H	E	K	A	V	D	V	L	Y	D	G	E	T	A	E	V	L	E	S	E	M	I	D	T	P	Y	T	H	G	A	G	C	T
Template Known Secondary structure					B									T						S													T	T	T		S							G	G	G	S		S	S	S								S	S													S			B	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	V	L	A	A	T	L	A	A	G	N	S	L	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	A	A	V	T	A	E	L	A	K	G	A	E	V	K	E	A	I	Y	A	A	K	E	F	I	T	A	A	I	K	E
Template Known Secondary structure												T	T																				T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions