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Job DescriptionP76658
Confidence29.50%DateThu Jan 5 12:25:18 GMT 2012
Rank212Aligned Residues141
% Identity19%Templatec1xnjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate PDBTitle: aps complex of human paps synthetase 1
Resolution1.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   328.330.........340.........350.........360..... ....370.........380......... 390.......
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Query Sequence  LKLAVAAARKRGEKVVMTNGVFDILHAGHVSYLANARK. . . . . . . LGDRLIVAVNSDASTKRLKGDSRP. VNPLEQRM. .
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Template Sequence  PTELKQKFKDMNADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLL. . . . . . . . HPLGGWTKDDDVPLMWRMKQ
Template Known Secondary structure  TT
SSS


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TTS

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   400.........410.........420.........430.........440.........450. ........460.........470.
 
   398.400.... .....410....... ..420.... .....430.........440 .........450
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Query Sequence  . . IVLGALE. AVDWVVSFEEDTP. . . . . . . QRLIAGI. . . . . LPDLLVKGGDYKPEEI. . . . . . . . . . . AGSKEVWANG.
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Template Sequence  HAAVLEEGVLNPETTVVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPHPETGKDLYEPSHGAKVLTMAPG
Template Known Secondary structure  TTSS
GGG

B






TT
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SSTT

B
TTT
SBSS
TT
TT
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   472.......480.........490.........500.........510.........520.........530.........540.........550.
 
   451........460. ........470......
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Query Sequence  . . . . . . . . . . . . . . . . . . GEVLVLNFEDG. . . . . CSTTNIIKKIQQDKK
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Template Sequence  LITLEIVPFRVAAYNKKKKRMDYYDSEHHEDFEFISGTRMRKLAREGQK
Template Known Secondary structure 
TTS


TTTT

STTTTT


TT

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   552.......560.........570.........580.........590.........600
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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