Job Description P76658 Confidence 34.64% Date Thu Jan 5 12:25:18 GMT 2012 Rank 188 Aligned Residues 131 % Identity 16% Template c1vi2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase 2; PDBTitle: crystal structure of shikimate-5-dehydrogenase with nad Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																		.												.
Query SS confidence																																																		.												.
Query Sequence		E	F	E	R	A	G	V	M	V	V	G	D	V	M	L	D	R	Y	W	Y	G	P	T	S	R	I	S	P	E	A	P	V	P	V	V	K	V	N	T	I	E	E	R	P	G	G	A	A	.	N	V	A	M	N	I	A	S	L	G	A	.	N	A	R	L	V	G	L	T	G	I	D	D	A	A	R	A	L	S	K
Query Conservation																																																		.												.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.												.								.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		D	I	K	G	K	T	X	V	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	.	.	R	D	E	F	F	D	K	A	L	A
Template Known Secondary structure				T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													T	T										.	.	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.																																	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	D	V	N	V	K	C	D	F	V	S	V	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	E	G	F	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L	S	D	Y	A	K	G	A	L	A	S	V	Q	Q	M	I
Query Conservation
Alig confidence																																																																											.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	X	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	X	T	.	.	.	.	K	L	L
Template Known Secondary structure										S	S								T	T											S		S						S	S	T	T	S	T	T		T	T			S		S		G	G	G			T	T									S	S	S	S		.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.
		165	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	R	K	A	G	V	P	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	A	Q	Q	A	G	C	K	T	I
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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