Return to main results Retrieve Phyre Job Id

Job DescriptionP76235
Confidence6.99%DateThu Jan 5 12:21:00 GMT 2012
Rank88Aligned Residues102
% Identity9%Templatec3b64A_
PDB info PDB header:cytokineChain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major
Resolution1.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260...... ...270.........280.........290. ........300.........310.........320.....
Predicted Secondary structure 






.






.....













Query SS confidence 














.
























. . . . .

































Query Sequence  FCLMDVSGSMDQSTK. DMAKRFYILLYLFLSRTYKNVEVVY. . . . . IRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMD
Query Conservation 
 







    
. 


    

   
      
 
  .....
   
 



 
     
 
 


 




  
 
Alig confidence 














.
























.....

































Template Conservation   
 
 

          
   

  

  




  


 
     
 



 

 
   
 


      
   
  
 
Template Sequence  VIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVACVRVEALGGYGPSEPEKVTSIVT
Template Known Secondary structure  SS


TS
S
GGG

S



BTTB
SS

TT


TT
Template Predicted Secondary structure 





















Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   326...330.........340.........350....
Predicted Secondary structure 














Query SS confidence 




























Query Sequence  EVVKERYNPAQWNIYAAQASDGDNWADDS
Query Conservation   
    
 
   
 
    




   
 
Alig confidence 
















.










Template Conservation    
   


   



 .
      
 

Template Sequence  AAITKECGIVADRIFVL. YFSPLHCGWNG
Template Known Secondary structure 


GGG.

S

TT
Template Predicted Secondary structure 





.



Template SS confidence 




























   82.......90........ .100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions