Job Description P76235 Confidence 99.48% Date Thu Jan 5 12:21:00 GMT 2012 Rank 2 Aligned Residues 172 % Identity 17% Template c2ok5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: human complement factor b Resolution 2.30 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.														.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	S	Q	A	V	M	F	C	L	M	D	V	S	G	S	M	D	Q	S	T	K	D	M	A	K	R	F	Y	I	L	L	Y	L	F	L	S	R	T	Y	K	N	V	E	V	V	Y	I	R	H	H	T	Q	A	K	E	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	E	F	F	Y	S	Q	E
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	G	S	M	N	I	Y	L	V	L	D	G	S	D	S	I	G	A	S	N	F	T	G	A	K	K	C	L	V	N	L	I	E	K	V	A	S	Y	G	V	K	P	R	Y	G	L	V	T	Y	A	T	Y	P	K	I	W	V	K	V	S	E	A	D	S	S	N	A	D	W	V	T	K	Q	L	N	E	I	N	Y
Template Known Secondary structure		T	T												S	S	S	T	T																				T	T	T											S	S	S							T	T	S	T	T	T	T											T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.												.	370	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	G	T	I	V	S	S	A	L	K	L	M	D	E	V	V	K	E	R	Y	N	P	A	Q	W	.	.	.	N	I	Y	A	A	Q	A	S	D	G	D	N	W	A	D	D	S	P	L	C	H	E	I	L	A	K	K	L	L	P	V	.	.	.	.	.	.	.	.	.	.	.	V	R	Y	Y	S	Y	I	E	I
Query Conservation																												.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																	.							.	.	.																																.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation				.																	.																																																											.
Template Sequence		E	G	.	T	N	T	K	K	A	L	Q	A	V	Y	S	M	M	S	W	.	V	P	P	E	G	W	N	R	T	R	H	V	I	I	L	M	T	D	G	L	H	N	M	G	G	D	P	I	T	V	I	D	E	I	R	D	L	L	Y	I	G	K	D	R	K	N	P	R	E	D	Y	L	D	V	Y	V	F	G	.	V
Template Known Secondary structure				.	B																.				T	T	G	G	G										S				B		S	S		T											T	T		S	S		T	T				G	G	G								.
Template Predicted Secondary structure				.																	.																																																											.
Template SS confidence
		320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	R	A	H	Q	T	L	W	R	E	Y	E	H	L	Q	S	T	F	D	N	F	A	M	Q	H	I	R	D	Q	D	D	I	Y	P	V	F	R	E	L	F	H	K	Q
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		G	P	L	V	N	Q	V	N	I	N	A	L	A	S	.	.	K	K	D	N	E	Q	H	V	F	K	V	K	D	M	E	N	L	E	D	V	F	Y	Q	M	I	D	E	S
Template Known Secondary structure		S	T	T	S									S		.	.			T	T								S															T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.			420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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