Return to main results Retrieve Phyre Job Id

Job DescriptionP76692
Confidence2.07%DateThu Jan 5 12:25:19 GMT 2012
Rank46Aligned Residues14
% Identity50%Templatec1erfA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:transmembrane glycoprotein; PDBTitle: conformational mapping of the n-terminal fusion peptide of2 hiv-1 gp41 using 13c-enhanced fourier transform infrared3 spectroscopy (ftir)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.....
Predicted Secondary structure 





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Query Sequence  LGALMLFFSGRVGN
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Template Conservation 


 









Template Sequence  IGALFLGFLGAAGS
Template Known Secondary structure 
S
Template Predicted Secondary structure 

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   4.....10.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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