Return to main results Retrieve Phyre Job Id

Job DescriptionP77788
Confidence99.80%DateThu Jan 5 12:32:50 GMT 2012
Rank60Aligned Residues121
% Identity17%Templated2a6ta2
SCOP infoNudix Nudix mRNA decapping enzyme-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.... .....20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 

..
























Query SS confidence 










. .


































































Query Sequence  IEVVAAIIERD. . GKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIHL
Query Conservation 
 
   

   ..
 


  
       
 
  


 

 

    

 

  




       
              
Alig confidence 










..










...


















































..
Template Conservation 
   
 

      




     ...   
  


 

 


   

 


 




 
                  ..
Template Sequence  IPVRGAIMLDMSMQQCVLVKGWKA. . . SSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPNEFIDMTIRGQN. .
Template Known Secondary structure 

B
SSSSSST...T


B
S

TT





TTT

TT
TT..
Template Predicted Secondary structure 






...





















..
Template SS confidence 















































































   96...100.........110......... 120.........130.........140.........150.........160.........170
 
   82.......90.........100.........110.........120.........
Predicted Secondary structure 



















Query SS confidence 















































Query Sequence  HAWHVPDFHGTLQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMALR
Query Conservation                 
     
    

            
       
Alig confidence 















































Template Conservation                 
     
     
           
   
  
 
Template Sequence  VRLYIIPGISLDTRFEISKIEWHNLMDLPTFKMKNKFYMVIPFLAPLK
Template Known Secondary structure 



TT



GGGSTT



GGGTTTGGG
Template Predicted Secondary structure 





















Template SS confidence 















































   171........180.........190.........200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions