|   |
1 | . | . | . | . | |
. | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
M | K | M | I | E | . |
V | V | A | A | I | I | E | R | D | G | K | I | L | L | A | Q | R | P | A | Q | S | D | Q | A | G | L | W | E | F | A | G | G | K | V | E | P | D | E | S | Q | R | Q | A | L | V | R | E | L | R | E | E | L | G | I | E | A | T | V | G | E | Y | V | A | S | H | Q | . |
. |
R | E | V | S | G | R |
Query Conservation |   |
|
|   |
|   | . |
|   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |
|
|   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   | . | . |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |
|   | . |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | G | A | S | R | L | Y | T | L | V | L | V | L | Q | P | Q | R | V | L | L | G | M | K | K | . |
R | G | F | G | A | G | R | W | N | G | F | G | G | K | V | Q | E | G | E | T | I | E | D | G | A | R | R | E | L | Q | E | E | S | G | L | T | V | D | A | L | H | K | V | G | Q | I | V | F | E | F | V | G | E | P | E |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|  |  |
| S | S |  |  |  |  |  |  |  | S | . | S | S | S | S | B | T |
|  |  |
| B |
|
| B |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| B | S |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
| S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | H | L | H | A | W | H | V | P | D | F | H | G | T | L | Q | A | H | E | H | Q | A | L | V | W | C | S | P | E | E | A | L | Q | Y | P | L | A | P | A | D | I | P | L | L | E | A | F | M | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
L | M | D | V | H | V | F | C | T | D | S | I | Q | G | T | P | V | E | S | D | E | M | R | P | C | W | F | Q | L | D | Q | I | P | F | K | D | M | W | P | D | D | S | Y | W | F | P | L | L | L | Q | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
| B |
| S |
|
|
|
|
| S | S |  |  |  |  |  |  |  | T | T |
|
|
| S | T | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |