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Job Description | P77788 | Confidence | 97.03% | Date | Thu Jan 5 12:32:50 GMT 2012 |
Rank | 83 | Aligned Residues | 68 |
% Identity | 22% | Template | c3p5tE_ |
PDB info |
PDB header:rna binding protein | Chain: E: PDB Molecule:cleavage and polyadenylation specificity factor subunit 5; |
PDBTitle: cfim25-cfim68 complex
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Resolution | 2.70 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | K | M | I | E | V | V | A | A | I | I | E | R | D | G | . |
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K | I | L | L | A | Q | R | P | A | Q | S | D | Q | A | G | L | W | E | F | A | G | G | K | V | E | P | D | E | S | Q | R | Q | A | L | V | R | E | L | R | E | E | L | G | I | . |
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E | A | T | V | G | E | Y | V | A | S | H | Q | R | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | R | R | T | V | E | G | V | L | I | V | H | E | H | R | L | P | H | V | L | L | L | Q | L | G | . |
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T | T | F | F | K | L | P | G | G | E | L | N | P | G | E | D | E | V | E | G | L | K | R | L | M | T | E | I | L | G | V | L | Q | D | W | V | I | D | D | C | I | G | N | W | W | R | P |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | T | T |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
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. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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