 |
Job Description | P77788 | Confidence | 15.22% | Date | Thu Jan 5 12:32:50 GMT 2012 |
Rank | 85 | Aligned Residues | 57 |
% Identity | 19% | Template | c3enoB_ |
PDB info |
PDB header:hydrolase/unknown function | Chain: B: PDB Molecule:putative o-sialoglycoprotein endopeptidase; |
PDBTitle: crystal structure of pyrococcus furiosus pcc1 in complex2 with thermoplasma acidophilum kae1
|
Resolution | 3.02 Å |
|
 |
  |   |
1 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | M | I | E | V | . |
. |
. |
. |
. |
. |
. |
V | A | A | I | I | E | R | D | G | K | I | L | L | A | Q | R | P | A | Q | S | D | Q | A | G | L | W | E | F | A | G | G | K | V | E | P | D | E | S | Q | R | Q | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | R | E | L | R | E | E | L | G | I | E | A | T | V |
Query Conservation |   |
|
|   |
|   |
| . | . | . | . | . | . | . |   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|
|   |   |
|   |
|   |
|
|
|   | . |
|
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |
|
Template Sequence |   |
M | I | V | L | G | L | E | G | T | A | H | T | I | S | C | G | I | I | D | . |
E | S | R | I | L | A | M | E | S | S | M | Y | R | P | K | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | R | P | L | D | A | A | V | H | H | S | E | V | I | D | T | V | I | S | R | A | L | E | K | A | K | I | S | I | H | D |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |
| . | S | S |
|
|
|  |  |  |  |  |  |
|
|
| T | T |
| . | . | . | . | . | . | . | . | . | . | . | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
  |
  |   |
64 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
G | E | Y | V | A | S |
Query Conservation |   |
  |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
Template Sequence |   |
I | D | L | I | G | F |
Template Known Secondary structure |   |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|