Return to main results Retrieve Phyre Job Id

Job DescriptionP77788
Confidence99.89%DateThu Jan 5 12:32:50 GMT 2012
Rank18Aligned Residues126
% Identity25%Templatec3dkuB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative phosphohydrolase; PDBTitle: crystal structure of nudix hydrolase orf153, ymfb, from2 escherichia coli k-1
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70. ........80
Predicted Secondary structure 























.



Query SS confidence 





































































.








Query Sequence  KMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQ. REVSGRIIH
Query Conservation 
 
 
   

   
 


  
       
 
  


 

 

    

 

  




       
    .         
Alig confidence 
























..










































.








Template Conservation 

 
 
  

   





      ..   
 



 

 

    

 


 




                      
Template Sequence  KPHVTVACVVHAEGKFLVVEETING. . KALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFL
Template Known Secondary structure 

TT
SS..S
S

TT









TTS
Template Predicted Secondary structure 







..

















Template SS confidence 















































































   3......10.........20....... ..30.........40.........50.........60.........70.........80
 
   81........90.. .......100.........110.... .....120.........
Predicted Secondary structure 



...












..


Query SS confidence 











. . .





















. .














Query Sequence  LHAWHVPDFHGT. . . LQAHEHQALVWCSPEEALQYPL. . APADIPLLEAFMALR
Query Conservation              ...    
     
    

     ..       
       
Alig confidence 











...





















..














Template Conservation                     
     
    

              
   
 
 
Template Sequence  RFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSGQ
Template Known Secondary structure 
SS






STT

S
BSSTT

Template Predicted Secondary structure 





















Template SS confidence 





















































   81........90.........100.........110.........120.........130....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions