Job Description P77788 Confidence 99.67% Date Thu Jan 5 12:32:50 GMT 2012 Rank 73 Aligned Residues 121 % Identity 18% Template c2pnyA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2; PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2 Resolution 1.81 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.
Predicted Secondary structure																							.							.													.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																							.							.													.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		V	V	A	A	I	I	E	R	D	G	K	I	L	L	A	Q	R	P	A	Q	S	.	D	Q	A	G	L	W	.	E	F	A	G	G	K	V	E	P	D	E	S	.	.	.	.	.	.	.	.	.	Q	R	Q	A	L	V	R	E	L	R	E	E	L	G	I	E	A	T	V	.	.	.	.	.	G	E	Y	V	A	S
Query Conservation																							.							.													.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																							.							.													.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		F	S	V	V	L	F	N	T	K	N	R	I	L	I	Q	Q	R	S	D	T	K	V	T	F	P	G	Y	F	T	D	S	C	S	S	H	P	L	Y	N	P	A	E	L	E	E	K	D	A	I	G	V	R	R	A	A	Q	R	R	L	Q	A	E	L	G	I	P	G	E	Q	I	S	P	E	D	I	V	F	M	T	I
Template Known Secondary structure									T	T										T	T		S	S	S	T	T		B			S						B	S	S							G	G	G																			T	T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		70	.	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Query Sequence		H	Q	R	.	.	.	.	.	.	E	V	S	G	R	I	I	H	L	H	A	W	H	V	P	D	F	H	G	T	L	Q	A	H	E	H	Q	A	L	V	W	C	S	P	E	E	A	L	Q	.	.	.	.	.	.	.	.	.	Y	P	L	A	P	A	D	I	P	L	L	E	A	F	M
Query Conservation					.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	H	H	K	A	K	S	D	R	I	W	G	E	H	E	I	C	Y	L	L	L	V	R	K	N	V	T	L	N	P	D	P	S	E	T	K	S	I	L	Y	L	S	Q	E	E	L	W	E	L	L	E	R	E	A	R	G	E	V	K	V	T	P	W	L	R	T	I	A	E	R	F	L
Template Known Secondary structure								S	S	S	S	B																					T	T	T																						T	S	S		B											T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions