Job Description P76362 Confidence 19.86% Date Thu Jan 5 12:22:22 GMT 2012 Rank 29 Aligned Residues 54 % Identity 19% Template c3zqoK_ PDB info PDB header:dna-binding protein Chain: K: PDB Molecule:terminase small subunit; PDBTitle: crystal structure of the small terminase oligomerization2 core domain from a spp1-like bacteriophage (crystal form 3) Resolution 1.68 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	T	S	T	R	A	A	R	E	W	L	I	L	N	M	A	G	L	E	R	E	E	F	R	V	L	Y	L	N	N	Q	N	Q	L	I	A	G	E	T	L	F	T	G	T	I	N	R	T	E	V	H	P	R	E	V	I	K	R	A	L	Y	H	N
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	I	L	Q	A	N	E	V	L	E	H	L	T	R	I	A	L	G	Q	E	K	E	Q	V	L	X	G	I	G	K	G	A	E	T	K	T	H	V	E	.	.	.	.	.	.	.	.	.	.	.	V	S	A	K	D	R	I	K	A	L	E	L	L	G
Template Known Secondary structure																			T	T												T	T									.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.												.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions