Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 22 Aligned Residues 419 % Identity 18% Template d1vdka_ SCOP info L-aspartase-like L-aspartase-like L-aspartase/fumarase Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		P	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	.	.	.	.	.	.	.	.	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S	F	S	E	E	D	A	A	R	I
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																																													.	.	.
Template Sequence		P	A	D	K	Y	W	G	A	Q	T	Q	R	S	L	E	N	F	R	I	G	T	D	R	F	R	M	P	L	E	I	I	R	A	Y	G	M	L	K	K	A	A	A	R	.	.	.	A	N	L	E	L	G	E	L	P	E	E	I	A	K	A	I	I	Q	A	A	E	E	V	V	Q	G	K	W	D	D	H	F	P	L
Template Known Secondary structure			T	T																S	S	T	T	T		B																			.	.	.					T	T	S	S																	T	T	T	T	G	G	G
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		83	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure													.																					.	.	.	.	.	.
Query SS confidence													.																					.	.	.	.	.	.
Query Sequence		K	T	I	E	R	T	T	N	H	D	V	.	K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	H	A	V	.	.	.	.	.	.	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P	Y	W	R	Q	L	I	D	G	I	K
Query Conservation													.																					.	.	.	.	.	.
Alig confidence													.																					.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	F	Q	T	G	S	G	T	Q	T	N	M	N	V	N	E	V	I	A	N	R	A	S	E	I	L	G	K	P	L	G	S	K	Y	A	H	P	N	D	H	V	N	R	G	Q	S	S	N	D	T	F	P	T	A	M	Y	V	A	V	A	L	A	L	H	Q	R	L	Y	P	A	V	E	G	L	I	R	T	F	T
Template Known Secondary structure		B	S	S	S		T	T																				T	T			T	T	S		S	S							T	T	T																						T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																	.	.	.								.
Query SS confidence																																																	.	.	.								.
Query Sequence		D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	.	.	.	I	L	G	K	I	N	G	.	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	W	H	Q	F	S	E
Query Conservation																																																	.	.	.								.
Alig confidence																																																	.	.	.								.														.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		A	K	A	Q	A	F	D	Q	I	V	K	V	G	R	T	H	L	M	D	A	V	P	I	T	L	G	Q	E	I	G	S	W	A	A	Q	L	K	T	T	L	A	A	V	K	E	M	E	K	G	L	Y	N	L	A	I	G	G	T	A	V	G	T	G	L	N	A	H	P	R	F	G	.	.	.	.	E	L	V	A	K
Template Known Secondary structure							T	T	T								T	T																															G	G	G	G				T	T		T	T	T	S	S		T	T	S		T	T			.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.
		232	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure											.	.	.																																									.	.	.
Query SS confidence											.	.	.																																									.	.	.
Query Sequence		E	F	V	T	S	L	G	I	Q	.	.	.	W	N	P	Y	T	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	.	.	.	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M	P	H	K	V	N	P	I
Query Conservation											.	.	.																																									.	.	.
Alig confidence											.	.	.																																									.	.	.
Template Conservation
Template Sequence		Y	L	A	E	E	T	G	L	P	F	R	V	A	E	N	R	F	A	A	L	A	A	H	D	E	L	V	N	V	M	G	A	I	R	T	L	A	G	A	L	M	K	I	G	N	D	V	R	W	L	A	S	G	P	Y	A	G	I	G	E	I	T	I	P	A	N	E	P	G	S	S	I	M	P	G	K	V	N	P	T
Template Known Secondary structure								S	S						S		T	T																																		T			S	S	S	S			S							S			S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	.	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D	H	N	W	E	V
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		Q	V	E	A	L	T	M	V	V	V	R	V	Y	G	N	D	H	T	V	A	F	A	G	S	Q	G	N	F	Q	L	N	V	Y	K	P	V	M	A	Y	S	T	L	E	S	I	N	L	L	A	D	A	V	A	S	F	D	A	H	L	A	Q	G	I	E	P	N	L	E	R	I	E	E	Y	L	Q	K	N	P	M	L
Template Known Secondary structure																									T	T		B	T	T	B		S																											T	G	G	G													T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	P	I	Q	T	V	M	R	R	Y	G	I	E	K	P	Y	E	K	L	K	E	L	T	R	G	K	R	V	D	A	E	G	M	K	Q	F	I	D	G	L	A	L	P	E	E	E	K	A	R	L	K	A	M	T	P	A	N	Y	I	G	R
Query Conservation
Alig confidence										.	.	.	.															.	.	.	.	.	.													.
Template Conservation										.	.	.	.															.	.	.	.	.	.													.
Template Sequence		A	T	A	L	N	K	A	I	.	.	.	.	G	Y	D	K	A	A	E	I	V	K	K	A	L	K	.	.	.	.	.	.	K	T	L	K	Q	A	A	L	E	L	G	Y	.	L	T	E	E	E	F	D	R	I	V	V	P	M	R	L	A	K	P
Template Known Secondary structure		G								.	.	.	.		S					T	T	T	T	T	S			.	.	.	.	.	.										T	S	S	.	S
Template Predicted Secondary structure										.	.	.	.															.	.	.	.	.	.													.
Template SS confidence
		409	410	.	.	.	.	.	.					.	.	.	420	.	.	.	.	.	.	.	.	.	430							.	.	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460