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Job DescriptionP0AB89
Confidence100.00%DateThu Jan 5 11:14:54 GMT 2012
Rank10Aligned Residues424
% Identity17%Templated1tj7a_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20......... 30.........40.........50.........60.........70.........80......
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Query Sequence  VDGRYGDKVSALRGIFSE. . . . . YGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEEDAARIKTIE
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Template Sequence  WGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTV. . . GVLTAEEQAQLEEALNVLLEDVRARPQQILESD
Template Known Secondary structure 

TT
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GGGT...TSS

GGGGGGS
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   4.....10.........20.........30.........40....... ..50.........60.........70.........80
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  RTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPL
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Template Sequence  AEDIH. . SWVEGKLIDKVG. . . . . . QLGKKLHTGRSRNDQVATDLKLWCKDTVSE. LLTANRQLQSALVETAQNNQDAVM
Template Known Secondary structure 
SS..G......GGGGGTTTT

.TTTT
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   81.... ....90....... ..100.........110.........120....... ..130.........140.........150.
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  LSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQWNPYTT
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Template Sequence  PGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVS. PLGCGALAGTAYE. . . . . IDREQLAGWLGFASATRNS
Template Known Secondary structure  TT

B.
TT
TTTT

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   152.......160.........170.........180.........190... ......200...... ...210.........220.....
 
   247..250.........260.........270.........280 .........290.........300.........310.........320..
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Query Sequence  . . QIEPHDYIAELFDCVARFNTILIDFDRDVWGYIA. . LNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQ
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Template Sequence  LDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELS. DRVTSGSSLMPQKKNPDALELIRGKCGRVQGALT
Template Known Secondary structure 

TSTTT



.GGG
B

TT
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   226...230.........240.........250.........260.........270 .........280.........290.........300....
 
   323......330.........340.........350.........360.........370.........380.........390......... 400
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Query Sequence  HLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIE. . K
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Template Sequence  GMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQ. QGYANATELADYLVAKGVPFRE
Template Known Secondary structure  TT

SS

GGGGGTT

T.STTTTTT

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   305....310.........320.........330.........340.........350.........360. ........370.........380...
 
   401........410.........420... ......430.........440..... ....450.....
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Query Sequence  PYEKLKELTRGKRVDAEGMKQFI. . . DGLALPEEEKARLKAMTPANYI. . . . . . . GRAITMVDEL
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Template Sequence  AHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQA
Template Known Secondary structure  T

GGGS
TTT
TT

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   384.....390.........400.........410.........420.........430.........440........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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