Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 26 Aligned Residues 383 % Identity 14% Template d1jswc_ SCOP info L-aspartase-like L-aspartase-like L-aspartase/fumarase Resolution 2.70

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.																		.	.	.	.	.	.	.	.
Query SS confidence												.																		.	.	.	.	.	.	.	.
Query Sequence		M	E	L	S	S	L	T	A	V	S	.	P	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	.	.	.	.	.	.	.	.	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V
Query Conservation												.																		.	.	.	.	.	.	.	.
Alig confidence												.																		.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																																																								.	.	.
Template Sequence		I	E	E	D	L	L	G	T	R	E	V	P	A	D	A	Y	Y	G	V	H	T	L	R	A	I	E	N	F	Y	I	S	N	N	K	I	S	D	I	P	E	F	V	R	G	M	V	M	V	K	K	A	A	A	M	.	.	.	A	N	K	E	L	Q	T	I	P	K	S	V	A	N	A	I	I	A	A	C	D	E	V
Template Known Secondary structure					B	T	T	B						T	T			S															S		B	S			S	S	S															.	.	.				T	T	T		S
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		72				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure			.	.	.																											.	.	.													.	.	.
Query SS confidence			.	.	.																											.	.	.													.	.	.
Query Sequence		A	.	.	.	S	F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V	K	A	V	E	Y	.	.	.	F	L	K	E	K	V	A	E	I	P	E	L	.	.	.	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V
Query Conservation			.	.	.																											.	.	.													.	.	.
Alig confidence			.	.	.																											.	.	.													.	.	.																																.
Template Conservation																																																																																	.
Template Sequence		L	N	N	G	K	C	M	D	Q	F	P	V	D	V	Y	Q	G	G	A	G	T	S	V	N	M	N	T	N	E	V	L	A	N	I	G	L	E	L	M	G	H	Q	K	G	E	Y	Q	Y	L	N	P	N	D	H	V	N	K	C	Q	S	T	N	D	A	Y	P	T	G	F	R	I	A	V	Y	S	S	L	I	K	.
Template Known Secondary structure			T	T	T		S	T	T					B	S	S			T	T	T																		T	T	T			S	T	T			S	S							S	T	T																						.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	P	Y	W	R	Q	L	I	D	G	I	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	I	L	G	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	D	A	I	N	Q	L	R	E	G	F	E	R	K	A	V	E	F	Q	D	I	L	K	M	G	R	T	Q	L	Q	D	A	V	P	M	T	L	G	Q	E	F	R	A	F	S	I	L	L	K	E	E	V	K	N	I	Q	R	T	A	E	L	L	L	E	V	N	L	G	A	T	A	I	G	T	G	L	N	T	P
Template Known Secondary structure																					T	T								T	T																															G	G	G	S				S	S			S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																									.	.	.
Query SS confidence																				.	.	.																																									.	.	.
Query Sequence		E	V	D	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	.	.	.	W	N	P	Y	T	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	.	.	.	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S
Query Conservation																				.	.	.																																									.	.	.
Alig confidence																				.	.	.																																									.	.	.
Template Conservation
Template Sequence		K	E	Y	S	P	L	A	V	K	K	L	A	E	V	T	G	F	P	C	V	P	A	E	D	L	I	E	A	T	S	D	C	G	A	Y	V	M	V	H	G	A	L	K	R	L	A	V	K	M	S	K	I	C	N	D	L	R	L	L	S	S	G	P	R	A	G	L	N	E	I	N	L	P	E	L	Q	A	G	S	S
Template Known Secondary structure		S	S														S	S						S		S	S	S	S	S	S																														B		S	S	S	S	S		B			B					S				T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		T	M	P	H	K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	.	G	V	S	K	L	E	V	N	R	D	H	L	L
Query Conservation																																																																				.
Alig confidence																																																																				.
Template Conservation
Template Sequence		I	M	P	A	K	V	N	P	V	V	P	E	V	V	N	Q	V	C	F	K	V	I	G	N	D	T	T	V	T	M	A	A	E	A	G	Q	L	Q	L	N	V	M	E	P	V	I	G	Q	A	M	F	E	S	V	H	I	L	T	N	A	C	Y	N	L	L	E	K	C	I	N	G	I	T	A	N	K	E	V	C	E
Template Known Secondary structure		T	S																														T	T			B	T	T	B		T	T																										T	G	G	G		B			T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		376	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	D	H	N	W	E	V	L	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	V	Y	N	S	I	G	I	V	T	Y
Template Known Secondary structure						S		T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions