Phyre 2 alignment of P0AB89 with d1f1oa

Job Description P0AB89
Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012

Rank 30 Aligned Residues 348

% Identity 24% Template d1f1oa_

SCOP info L-aspartase-like L-aspartase-like L-aspartase/fumarase

Resolution 3.25

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	L	R	G	I	F	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S	F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V	K	A	V	E	Y	F	L	K
Query Conservation
Alig confidence																									.	.	.																					.	.	.	.	.	.	.
Template Conservation																									.	.	.																					.	.	.	.	.	.	.
Template Sequence	E	M	S	A	I	W	T	D	E	N	R	F	Q	A	W	L	E	V	E	I	L	A	C	E	.	.	.	A	W	A	E	L	G	V	I	P	K	E	D	V	K	V	M	R	E	N	A	.	.	.	.	.	.	.	S	F	D	I	N	R	I	L	E	I	E	K	D	T	R	H	D	V	V	A	F	T	R	A	V	S
Template Known Secondary structure		T	G	G	G	T	S	T	T																.	.	.					T	T	S	S		T	T	T							S		.	.	.	.	.	.	.					G	G	G	S	S	S	S	S							T							T
Template Predicted Secondary structure																									.	.	.																					.	.	.	.	.	.	.
Template SS confidence
	9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

	102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	K	V	A	E	I	P	E	L	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P	Y	W	R	Q	L	I	D	G	I	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G
Query Conservation
Alig confidence					.	.	.	.	.	.																															.																									.	.
Template Conservation					.	.	.	.	.	.																															.																									.	.
Template Sequence	E	S	L	G	.	.	.	.	.	.	E	E	R	K	W	V	H	Y	G	L	T	S	T	D	V	V	D	T	A	L	S	Y	L	L	K	Q	A	N	D	I	.	L	L	K	D	L	E	R	F	V	D	I	I	K	E	K	A	K	E	H	K	Y	T	V	M	.	.	M	T	H	G	V	H	A	E	P	T	T	F	G
Template Known Secondary structure	S		S	S	.	.	.	.	.	.		S	S	S	S																										.															T	T	T					S	S	S	.	.	S	S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.																															.																									.	.
Template SS confidence
	79	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.

	182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	I	L	G	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	W	N	P	Y	T	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence	L	K	L	A	L	W	H	E	E	M	K	R	N	L	E	R	F	K	Q	A	K	A	G	I	E	V	G	K	I	S	G	N	I	.	.	.	.	.	.	.	.	.	.	.	D	P	F	V	E	Q	Y	V	C	E	K	L	G	L	K	A	A	P	I	S	T	Q	T	L	Q	R	D	R	H	A	D	Y	M	A	T	L
Template Known Secondary structure																							T							S		S	S	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T						T	T					S	S			S	S			T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

	262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M	P	H	K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T
Query Conservation
Alig confidence																											.	.	.	.	.	.																																						.
Template Conservation																											.	.	.	.	.	.																																						.
Template Sequence	A	L	I	A	T	S	I	E	K	F	A	V	E	I	R	G	L	Q	K	S	E	T	R	E	V	E	.	.	.	.	.	.	E	F	S	A	M	P	H	K	R	N	P	I	G	S	E	N	M	T	G	M	A	R	V	I	R	G	Y	M	M	T	A	Y	E	N	V	P	L	.	W	H	E	R	D	I	S	H	S	S
Template Known Secondary structure																		S	S	S	S	S		S			.	.	.	.	.	.	S	S	S	S	S	S	T	T																						T	S		S	S	T	T		.			T					T	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.																																						.
Template SS confidence
	227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.

	342	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure				.																																				.								.
Query SS confidence				.																																				.								.
Query Sequence	V	L	R	.	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D	.	H	N	W	E	V	L	A	.	E	P	I	Q	T	V	M	R	R	Y	G	I	E	K	P	Y	E	K	L	K
Query Conservation				.																																				.								.
Alig confidence				.																																				.								.
Template Conservation
Template Sequence	A	E	R	I	I	L	P	D	A	T	I	A	L	N	Y	M	L	N	R	F	S	N	I	V	K	N	L	T	V	F	P	E	N	M	K	R	N	L	I	Y	S	Q	R	V	L	L	A	E	E	K	I	T	S	R	L	S	P	E	K	I	A	D	C	F	D	Y	N	Y
Template Known Secondary structure																				T	T					T	T	T							T	T		S	S	S	S	S	S		S	S		S					G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
	308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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