Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 31 Aligned Residues 356 % Identity 14% Template c3r6yG_ PDB info PDB header:lyase Chain: G: PDB Molecule:aspartase; PDBTitle: crystal structure of chymotrypsin-treated aspartase from bacillus sp.2 ym55-1 Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure													.																						.	.	.	.	.	.
Query SS confidence													.																						.	.	.	.	.	.
Query Sequence		M	E	L	S	S	L	T	A	V	S	P	.	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	S	E	Y	G	L	.	.	.	.	.	.	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S
Query Conservation													.																						.	.	.	.	.	.
Alig confidence													.																						.	.	.	.	.	.														.	.	.
Template Conservation																																																						.	.	.
Template Sequence		I	E	K	D	F	L	G	E	K	E	I	P	K	D	A	Y	Y	G	V	Q	T	I	R	A	T	E	N	F	P	I	T	G	Y	R	I	H	P	E	L	I	K	S	L	G	I	V	K	K	S	A	A	L	.	.	.	A	N	M	E	V	G	L	L	D	K	E	V	G	Q	Y	I	V	K	A	A	D	E	V	I	E
Template Known Secondary structure						S	S							T	T		S														S	S																						.	.	.					T	T	S	S																	T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.
Query Sequence		F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V	K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	H	A	V	S	E	F	.	.	.	.	.	.	.	.	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P
Query Conservation																																													.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.																										.
Template Conservation																																																																														.
Template Sequence		G	K	W	N	D	Q	F	I	V	D	P	I	Q	G	G	A	G	T	S	I	N	M	N	A	N	E	V	I	A	N	R	A	L	E	L	M	G	E	E	K	G	N	Y	S	K	I	S	P	N	S	H	V	N	M	S	Q	S	T	N	D	A	F	P	T	A	T	H	I	A	V	L	S	L	L	N	Q	.	L	I	E
Template Known Secondary structure		T	T	T	T	T	T					S	S		S	G	G	G																			T	T			T	T		T	T	T	S							T	T	T																						.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																														.	.	.					.
Query SS confidence																																																														.	.	.					.
Query Sequence		Y	W	R	Q	L	I	D	G	I	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	I	L	G	.	.	.	K	I	N	G	.	A	V	G	N	Y	N	A	H	I	A	A	Y
Query Conservation																																																														.	.	.					.
Alig confidence																																																														.	.	.					.
Template Conservation
Template Sequence		T	T	K	Y	M	Q	Q	E	F	M	K	K	A	D	E	F	A	G	V	I	K	M	G	R	T	H	L	Q	D	A	V	P	I	L	L	G	Q	E	F	E	A	Y	A	R	V	I	A	R	D	I	E	R	I	A	N	T	R	N	N	L	Y	D	I	N	M	G	A	T	A	V	G	T	G	L	N	A	D	P	E	Y
Template Known Secondary structure																	S	S	S								T	T																												T	T	S	G	G	G	S				T	T		T	T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		P	E	V	D	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	.	.	.	W	N	P	Y	T	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M
Query Conservation																					.	.	.
Alig confidence			.	.	.	.															.	.	.																																									.	.	.	.	.	.	.
Template Conservation			.	.	.	.																																																										.	.	.	.	.	.	.
Template Sequence		I	.	.	.	.	S	I	V	T	E	H	L	A	K	F	S	G	H	P	L	R	S	A	Q	H	L	V	D	A	T	Q	N	T	D	C	Y	T	E	V	S	S	A	L	K	V	C	M	I	N	M	S	K	I	A	N	D	L	R	L	M	A	S	.	.	.	.	.	.	.	G	P	R	A	G	L	S	E	I	V	L
Template Known Secondary structure			.	.	.	.													S						S	S	T	T																																		T		.	.	.	.	.	.	.		S	S	S	S
Template Predicted Secondary structure			.	.	.	.																																																										.	.	.	.	.	.	.
Template SS confidence
		243					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300								.	.	.	.	.	.	.	.	.	310	.
		299	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.
Predicted Secondary structure					.	.	.																																																														.
Query SS confidence					.	.	.																																																														.
Query Sequence		P	H	K	.	.	.	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	.	G	V	S	K	L	E	V	N	R
Query Conservation					.	.	.																																																														.
Alig confidence					.	.	.																																																														.
Template Conservation
Template Sequence		P	A	R	Q	P	G	V	N	P	V	M	P	E	V	M	N	Q	V	A	F	Q	V	F	G	N	D	L	T	I	T	S	A	S	E	A	G	Q	F	E	L	N	V	M	E	P	V	L	F	F	N	L	I	Q	S	I	S	I	M	T	N	V	F	K	S	F	T	E	N	C	L	K	G	I	K	A	N	E
Template Known Secondary structure					S																																	B	T	T	B		T	T																										T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions