Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 25 Aligned Residues 401 % Identity 16% Template c3ocfB_ PDB info PDB header:lyase Chain: B: PDB Molecule:fumarate lyase:delta crystallin; PDBTitle: crystal structure of fumarate lyase:delta crystallin from brucella2 melitensis in native form Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.									.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.																			.	.	.	.	.	.	.	.
Query SS confidence												.																			.	.	.	.	.	.	.	.
Query Sequence		M	E	L	S	S	L	T	A	V	S	.	P	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	S	.	.	.	.	.	.	.	.	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V
Query Conservation												.																			.	.	.	.	.	.	.	.
Alig confidence												.																			.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																																								.	.	.
Template Sequence		R	E	Q	D	S	L	G	E	R	D	I	P	M	D	A	Y	F	G	I	Q	T	L	R	A	V	E	N	F	S	L	S	D	V	A	L	N	H	I	P	A	L	V	R	A	L	A	M	V	K	K	A	A	A	T	.	.	.	A	N	Y	K	L	R	Q	L	P	E	P	K	Y	A	A	I	V	A	A	C	D	D	I
Template Known Secondary structure						T	T							T	T		S	S											S			S	S		B	G	G	G	S																	.	.	.					T	T	S	S
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		72	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure				.	.																										.	.	.													.	.	.
Query SS confidence				.	.																										.	.	.													.	.	.
Query Sequence		A	S	.	.	F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V	K	A	V	E	Y	.	.	.	F	L	K	E	K	V	A	E	I	P	E	L	.	.	.	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I
Query Conservation				.	.																										.	.	.													.	.	.
Alig confidence				.	.																										.	.	.													.	.	.																																.
Template Conservation																																																																																.
Template Sequence		I	D	G	L	L	M	E	Q	F	V	V	D	V	F	Q	G	G	A	G	T	S	S	N	M	N	A	N	E	V	I	A	N	R	A	L	E	H	L	G	R	P	R	G	D	Y	Q	T	I	H	P	N	D	D	V	N	M	S	Q	S	T	N	D	V	Y	P	T	A	V	R	L	A	L	L	L	S	Q	N	Q	.	V
Template Known Secondary structure			T	T	T	T	G	G	G				B	T	T		S	S	T	T																			T	T			T	T		T	T	T	S							T	T	T																		T				.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		L	P	Y	W	R	Q	L	I	D	G	I	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	I	L	G	.	.	.	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A
Query Conservation																																																																.	.	.
Alig confidence																																																																.	.	.													.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Q	T	A	L	H	R	L	I	A	A	F	E	A	K	G	R	E	F	A	T	V	I	K	I	G	R	T	Q	L	Q	D	A	V	P	I	T	L	G	Q	E	F	E	A	F	A	A	T	L	R	E	D	T	A	R	L	E	E	V	A	A	L	F	R	E	V	N	L	G	G	H	A	Y	A	E	Q	A	I	.	.	.
Template Known Secondary structure																			T	T	T								T	T																																G	G	G				T	T										.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		Y	P	E	V	D	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	W	N	P	Y	T	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	.	.	.	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T
Query Conservation																																																														.	.	.
Alig confidence		.	.	.	.	.	.															.																																								.	.	.
Template Conservation		.	.	.	.	.	.															.
Template Sequence		.	.	.	.	.	.	V	E	L	S	Q	I	S	G	I	E	L	K	A	T	.	G	N	L	V	E	A	S	W	D	T	G	A	F	V	T	F	S	G	I	L	R	R	I	A	V	K	L	S	K	I	A	N	D	L	R	L	L	S	S	G	P	R	S	G	L	G	E	I	R	L	P	A	V	Q	P	G	S	S	I
Template Known Secondary structure		.	.	.	.	.	.								T	S						.	S						T	T																														T			S	S	S	S										S				T	T
Template Predicted Secondary structure		.	.	.	.	.	.															.
Template SS confidence
								247	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		M	P	H	K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	.	G	V	S	K	L	E	V	N	R	D	H	L	L	D
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		M	P	G	K	V	N	P	V	I	P	E	S	V	N	Q	V	C	Y	Q	V	I	G	N	D	L	T	V	T	M	A	A	E	S	G	Q	L	Q	L	N	A	F	E	P	L	I	V	Y	N	I	L	S	S	M	R	L	L	G	R	A	M	T	N	L	A	E	R	C	V	D	G	I	E	A	N	V	E	R	C	R	A
Template Known Secondary structure		S	T	T																														T		B	T	T	B		T	T																										T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	D	H	N	W	E	V	L	A	E	P	I	Q	T	V	M	R	R	Y	G	I	E	K	P	Y	E	K	L	K	E	L	T	R	G	K	R	V	D	A	E	G	M	K	Q	F	I
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		G	A	E	E	S	I	S	L	A	T	A	L	V	P	V	V	.	.	.	.	.	.	.	.	G	Y	A	R	A	A	E	I	A	K	Q	A	L	A	S	G	Q	T	V	M	E	V	A
Template Known Secondary structure					T		G	G	G	G	G	G	G					.	.	.	.	.	.	.	.														T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.									.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.