Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 24 Aligned Residues 427 % Identity 15% Template c3no9C_ PDB info PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase class ii; PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis Resolution 2.48 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure												.																			.	.	.	.	.	.
Query SS confidence												.																			.	.	.	.	.	.
Query Sequence		M	E	L	S	S	L	T	A	V	S	.	P	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	S	.	.	.	.	.	.	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S
Query Conservation												.																			.	.	.	.	.	.
Alig confidence												.																			.	.	.	.	.	.																		.	.	.
Template Conservation																																																						.	.	.
Template Sequence		I	E	H	D	T	M	G	E	V	R	V	P	A	K	A	L	W	R	A	Q	T	Q	R	A	V	E	N	F	P	I	S	G	R	G	L	E	R	T	Q	I	R	A	L	G	L	L	K	G	A	C	A	Q	.	.	.	V	N	S	D	L	G	L	L	A	P	E	K	A	D	A	I	I	A	A	A	A	E	I	A	D
Template Known Secondary structure				B		S	S	S	B				B	T	T																S	S	S																					.	.	.					T	T	S	S																	T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V	.	K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P	Y	W	R	Q	L	I	D
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		G	Q	H	D	D	Q	F	P	I	D	V	F	Q	T	G	S	G	T	S	S	N	M	N	T	N	E	V	I	A	S	I	A	A	K	G	G	V	T	L	H	P	N	D	D	V	N	M	S	Q	S	S	N	D	T	F	P	T	A	T	H	I	A	A	T	E	A	A	V	A	H	L	I	P	A	L	Q	Q	L	H	D
Template Known Secondary structure		T	T	T	T	T	S					S	S	S		T	T																		T	T	T										T	T	T																						T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.								.
Query SS confidence																																																				.	.	.								.
Query Sequence		G	I	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	.	.	.	I	L	G	K	I	N	G	.	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	W	H	Q
Query Conservation																																																				.	.	.								.
Alig confidence																																																				.	.	.								.														.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		A	L	A	A	K	A	L	D	W	H	T	V	V	K	S	G	R	T	H	L	M	D	A	V	P	V	T	L	G	Q	E	F	S	G	Y	A	R	Q	I	E	A	G	I	E	R	V	R	A	C	L	P	R	L	G	E	L	A	I	G	G	T	A	V	G	T	G	L	N	A	P	D	D	F	G	.	.	.	.	V	R
Template Known Secondary structure										T	T	T								T	T																												T	T					T				T	T		T	T	T	S	S		T	T	S		T	T			.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		F	S	E	E	F	V	T	S	L	G	I	Q	W	.	.	.	.	N	P	Y	T	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M	P	H	K	V	N	P
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																																														.	.	.
Template Conservation																																																																.	.	.
Template Sequence		V	V	A	V	L	V	A	Q	T	G	L	S	E	L	R	T	A	A	N	S	F	E	A	Q	A	A	R	D	G	L	V	E	A	S	G	A	L	R	T	I	A	V	S	L	T	K	I	A	N	D	I	R	W	M	G	S	G	P	L	T	G	L	.	.	.	A	E	I	Q	L	P	D	L	Q	P	G	K	V	N	P
Template Known Secondary structure													T	T					S	S	T	T																																		T			T	T	T	S		.	.	.								S
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	.	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D	H	N	W	E
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		V	L	P	E	A	V	T	Q	V	A	A	Q	V	I	G	N	D	A	A	I	A	W	G	G	A	N	G	A	F	E	L	N	V	Y	I	P	M	M	A	R	N	I	L	E	S	F	K	L	L	T	N	V	S	R	L	F	A	Q	R	C	I	A	G	L	T	A	N	V	E	H	L	R	R	L	A	E	S	S	P	S
Template Known Secondary structure																											T		B	T	T	B																													T	T	T	T													T	T		G	G
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		V	L	A	E	P	I	Q	T	V	M	R	R	Y	G	I	E	K	P	Y	E	K	L	K	E	L	T	R	G	K	R	V	D	A	E	G	M	K	Q	F	I	D	G	L	A	L	.	.	P	E	E	E	K	A	R	L	K	A	M	T	P	A	N	Y	I
Query Conservation																																															.	.
Alig confidence								.	.	.	.															.	.	.	.																		.	.
Template Conservation								.	.	.	.															.	.	.	.
Template Sequence		I	V	T	P	L	N	.	.	.	.	S	A	I	G	Y	E	E	A	A	A	V	A	K	Q	.	.	.	.	A	L	K	E	R	K	T	I	R	Q	T	V	I	D	R	G	L	I	G	D	L	S	I	E	D	L	D	R	R	L	D	V	L	A	M	A
Template Known Secondary structure		G		S	G	G	G	.	.	.	.	G	T	S												.	.	.	.					T											T														T						T
Template Predicted Secondary structure								.	.	.	.															.	.	.	.
Template SS confidence
		408	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.					.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.