Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 29 Aligned Residues 363 % Identity 15% Template c3gtdB_ PDB info PDB header:lyase Chain: B: PDB Molecule:fumarate hydratase class ii; PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		P	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	S	.	.	.	.	.	.	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S	F	S	E	E	D	A	A	R	I	K	T
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																		.	.	.
Template Conservation																																											.	.	.
Template Sequence		E	E	K	F	Y	W	G	A	Q	T	Q	R	S	L	N	N	F	K	I	S	K	Q	K	M	P	K	I	L	I	R	A	L	A	I	L	K	K	C	A	A	Q	.	.	.	V	N	Y	E	F	G	D	L	E	Y	K	I	A	T	S	I	D	K	A	I	D	R	I	L	A	G	E	F	E	D	N	F	P	L	V	V
Template Known Secondary structure			T	T																		S		B																			.	.	.					T	T		S																	T	T	T	T	G	G	G				B	S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		85	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure											.																		.	.	.	.	.	.	.
Query SS confidence											.																		.	.	.	.	.	.	.
Query Sequence		I	E	R	T	T	N	H	D	V	.	K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	.	.	.	.	.	.	.	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P	Y	W	R	Q	L	I	D	G	I	K	D
Query Conservation											.																		.	.	.	.	.	.	.
Alig confidence											.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	Q	T	G	S	G	T	Q	T	N	M	N	M	N	E	V	I	A	S	I	A	N	E	E	L	T	G	K	K	G	G	K	F	P	V	H	P	N	D	H	V	N	K	G	Q	S	S	N	D	S	F	P	T	A	M	H	I	A	T	V	L	A	T	K	Q	Q	L	I	P	A	L	N	N	L	L	T	Y	L	Q	D
Template Known Secondary structure		S	S		T	T																						S	S		S	S	S	S	S	S							T	T	T																						T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																.	.	.								.
Query SS confidence																																																.	.	.								.
Query Sequence		L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	.	.	.	I	L	G	K	I	N	G	.	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	W	H	Q	F	S	E	E
Query Conservation																																																.	.	.								.
Alig confidence																																																.	.	.								.														.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		K	S	K	D	W	D	K	I	I	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	K	Q	E	F	S	G	Y	I	T	Q	I	E	Y	A	L	E	R	I	E	D	A	L	K	K	V	Y	L	L	A	Q	G	G	T	A	V	G	T	G	I	N	S	K	I	G	F	D	.	.	.	.	I	K	F	A	Q	K
Template Known Secondary structure				T	T		T	T								T	T																															T	T	T	T				T	T		T	T	T	S	S		T	T	S		T	T			.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		F	V	T	S	L	G	I	Q	W	N	P	Y	T	.	.	.	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M	P	H	K	V	N	P	I	D	F	E	N
Query Conservation															.	.	.
Alig confidence															.	.	.																																										.
Template Conservation																																																											.
Template Sequence		V	A	E	F	T	Q	Q	P	F	K	T	A	P	N	K	F	E	S	L	A	A	H	D	A	L	V	E	F	S	G	T	L	N	T	I	A	V	S	L	M	K	I	A	N	D	I	R	L	L	G	S	G	P	R	C	G	L	.	G	E	L	H	L	P	E	N	E	P	M	P	G	K	V	N	P	T	Q	V	E	A
Template Known Secondary structure							T	S						S																																					T			S	S	S	S		.												T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	.	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D	H	N
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		L	T	M	V	C	T	Q	V	M	G	N	H	V	T	V	T	I	A	G	S	N	G	H	L	E	L	N	V	F	K	P	V	I	I	Y	N	I	L	Q	S	I	E	L	L	S	D	S	V	N	S	F	V	T	H	C	V	K	G	L	E	P	N	I	A	R	I	N	T	L	R	D	K	S
Template Known Secondary structure																					T	T		B	T	T	B																													T	G	G	G													T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions