Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 18 Aligned Residues 410 % Identity 20% Template c3c8tA_ PDB info PDB header:lyase Chain: A: PDB Molecule:fumarate lyase; PDBTitle: crystal structure of fumarate lyase from mesorhizobium sp. bnc1 Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S	F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N
Query Conservation
Alig confidence											.																											.	.	.																							.	.	.	.
Template Conservation											.																											.	.	.																							.	.	.	.
Template Sequence		P	L	Y	G	R	S	F	A	D	.	D	K	M	R	E	L	F	S	A	Q	S	F	I	S	R	C	V	E	T	E	V	A	L	A	R	A	.	.	.	Q	A	R	L	G	I	I	P	E	D	A	A	A	G	I	T	A	A	A	R	T	F	.	.	.	.	A	P	E	M	E	R	L	R	D	D	T	E	I	V	G
Template Known Secondary structure				S	S				S		.							T	S																			.	.	.				T	T	S	S																.	.	.	.															S
Template Predicted Secondary structure											.																											.	.	.																							.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	V	K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P	Y	W	R	Q	L	I	D	G	I	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T
Query Conservation
Alig confidence																	.	.	.	.	.	.																															.
Template Conservation																	.	.	.	.	.	.																															.
Template Sequence		Y	P	I	L	P	L	V	E	Q	L	S	A	H	A	G	.	.	.	.	.	.	E	A	G	K	Y	L	H	W	G	A	T	T	Q	D	I	M	D	T	A	T	V	L	Q	I	R	D	G	L	A	L	.	I	S	R	R	I	E	S	V	R	K	A	L	A	A	L	A	R	N	H	R	D	T	P	M	A	G	R	T
Template Known Secondary structure		S	S													G	.	.	.	.	.	.	G	G	G	G	G	S	S	S	S																						.																			T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.																															.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		H	G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	.	.	.	I	L	G	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	W	N	P	Y	T	T	Q
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.																					.	.	.	.	.																		.
Template Conservation																																																									.	.	.	.	.																		.
Template Sequence		H	L	Q	H	A	L	P	V	T	F	G	Y	K	A	A	V	W	L	S	A	F	D	R	H	A	A	R	L	E	E	I	S	P	R	V	L	V	V	E	F	S	G	A	S	G	T	L	A	S	L	G	T	R	G	L	.	.	.	.	.	D	V	Q	R	E	L	A	R	E	L	N	L	G	V	P	S	I	.	T	W
Template Known Secondary structure		T	T																																			B						T	T	S	S		G	G	G	T	T				.	.	.	.	.											T		B			S	S	.
Template Predicted Secondary structure																																																									.	.	.	.	.																		.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M	P	H	K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	A	R	D	A	V	A	E	T	V	Q	F	L	A	L	V	S	G	S	L	G	K	L	A	M	D	I	S	I	M	M	T	T	E	L	G	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	P	N	P	V	S	C	E	L	I	L	A	G	A	R	I	V	R	N	H	A	T	S	M	L	D	A
Template Known Secondary structure		S	S																														T	S	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.														.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																			.																																				.																.
Query SS confidence																			.																																				.																.
Query Sequence		L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	.	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D	.	H	N	W	E	V	L	A	E	P	I	Q	T	V	M	R	.	R	Y	G	I	E	K	P	Y	E	K
Query Conservation																			.																																				.																.
Alig confidence						.													.																																				.																.
Template Conservation						.
Template Sequence		M	I	H	D	.	F	E	R	A	T	G	P	W	H	L	E	W	S	A	V	P	E	G	F	A	V	A	S	G	I	L	Y	Q	A	E	F	M	L	G	G	L	Q	V	F	P	D	R	M	R	E	N	L	D	H	S	R	G	L	I	V	A	E	A	V	M	M	A	L	A	P	H	T	G	R	K	E	A	H	D	I
Template Known Secondary structure		T				.	T	T																																	S													T	T	T	T	T	G	G	G
Template Predicted Secondary structure						.
Template SS confidence
		320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		L	K	E	L	T	R	G	K	R	V	D	A	E	G	M	K	Q	F	I	D	G	L	.	.	.	A	L	P	E	E	E	K	A	R	L	K	A	M	T	P	A	N	Y	I	G	R	A	I	T	M	V	D	E	L
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		V	Y	L	G	C	R	R	A	V	E	D	K	T	G	L	F	E	V	L	R	T	M	P	E	V	A	K	P	L	G	E	E	A	L	R	D	L	T	D	P	R	N	Y	L	G	S	A	G	A	M	V	D	N	V
Template Known Secondary structure												T	T	S							T	T																	T		G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.