Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 3 Aligned Residues 442 % Identity 46% Template c2qgaC_ PDB info PDB header:lyase Chain: C: PDB Molecule:adenylosuccinate lyase; PDBTitle: plasmodium vivax adenylosuccinate lyase pv003765 with amp bound Resolution 2.01 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		L	T	A	V	S	P	V	D	G	R	Y	G	D	K	V	S	A	L	R	G	I	F	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	.	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S	F	S	E	E	D	A	A	R	I	K	T
Query Conservation																																														.
Alig confidence																																														.																			.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		L	K	N	I	S	P	I	D	G	R	Y	K	K	A	C	G	E	L	S	A	F	F	S	E	H	A	L	I	K	H	R	I	I	V	E	V	R	W	L	L	F	L	N	E	E	E	L	F	F	E	K	V	T	D	H	S	V	E	V	L	N	Q	I	.	.	.	A	T	N	I	T	D	S	D	I	A	R	V	K	A
Template Known Secondary structure		G	G		S	S	T	T	T	T	T	T					G	G	G	G	G	T	S	S																							T	S	S	S															.	.	.
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		I	E	R	T	T	N	H	D	V	K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	.	.	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P	Y	W	R	Q	L	I	D	G	I	K	D	L	A	V	Q	Y	R
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		I	E	E	E	T	N	H	D	V	K	A	V	E	Y	F	V	K	E	K	L	K	N	S	K	R	E	D	L	L	K	I	K	E	Y	V	H	Y	L	C	T	S	E	D	I	N	N	V	A	Y	A	T	C	L	K	A	C	L	N	D	V	V	I	P	C	L	E	K	I	M	L	K	L	K	D	L	A	V	E	Y	S
Template Known Secondary structure							S																T	S	S								G	G	G	T	T	T	T																						T																			T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	I	L	G	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	.	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	W
Query Conservation																																																																	.
Alig confidence																																																																	.
Template Conservation
Template Sequence		H	V	P	L	L	S	R	T	H	G	Q	P	A	S	S	T	T	F	G	K	E	M	A	N	F	Y	A	R	I	H	H	H	V	G	V	I	R	R	V	K	V	C	A	K	F	N	G	A	V	G	N	F	N	A	H	K	V	A	S	K	D	T	D	W	V	N	T	I	G	L	F	L	K	K	H	F	N	L	T	Y
Template Known Secondary structure		T								T	T																													S									T	T	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	Y	T	T	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M	P	H	K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L
Query Conservation
Alig confidence																																														.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		S	I	Y	C	T	Q	I	Q	D	H	D	Y	I	C	E	L	C	D	G	L	A	R	A	N	G	T	L	I	D	L	C	V	D	I	W	L	Y	I	S	N	N	L	L	K	.	.	.	.	.	L	K	V	G	S	S	T	M	P	H	K	V	N	P	I	D	F	E	N	A	E	G	N	L	H	I	A	N	A	F	F
Template Known Secondary structure						S	S	S																																	T	T	S			.	.	.	.	.						S	S		T	T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D	H	N	W	E	V	L	A	E	P	I	Q	T	V	M	R	R	Y	G	I	E	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	F	S	S	K	L	P	T	S	R	L	Q	R	D	L	S	D	S	T	V	L	R	N	I	G	S	S	L	A	Y	C	L	I	A	Y	K	S	V	L	K	G	L	N	K	I	D	I	D	R	R	N	L	E	E	E	L	N	Q	N	W	S	T	L	A	E	P	I	Q	I	V	M	K	R	H	N	Y	V	D	A
Template Known Secondary structure								T	T			S	T	T			T							T	T																				T	T														T		G	G	G	G											T	T		S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.			.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		Y	E	K	L	K	E	L	T	R	G	K	R	V	D	A	E	G	M	K	Q	F	I	D	G	L	A	L	P	E	E	E	K	A	R	L	K	A	.	.	M	T	P	A	N	Y	I	G	R	A	I	T	M	V	D	E	L
Query Conservation																																							.	.
Alig confidence																																							.	.
Template Conservation
Template Sequence		Y	E	E	L	K	Q	F	T	R	G	K	V	I	D	Q	K	I	M	Q	E	F	I	K	T	K	C	A	F	L	P	Q	D	V	V	D	Q	L	L	E	L	T	P	A	T	Y	T	G	Y	A	D	Y	L	A	K	N	V
Template Known Secondary structure										T	T	S															S	T	T	S													T	T	T			T	T							T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.