Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 5 Aligned Residues 416 % Identity 22% Template c2pfmA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase (purb) from bacillus2 anthracis Resolution 2.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	Y	G	D	K	V	S	A	L	R	G	I	F	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S	F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V
Query Conservation
Alig confidence								.	.																									.	.	.																						.	.	.	.	.	.	.
Template Conservation								.	.																									.	.	.																						.	.	.	.	.	.	.
Template Sequence		S	R	Y	T	R	P	.	.	E	M	G	A	I	W	T	E	E	N	K	F	K	A	W	L	E	V	E	I	L	A	C	E	.	.	.	A	W	A	E	L	G	D	I	P	K	E	D	V	K	K	I	R	E	H	A	S	.	.	.	.	.	.	.	F	D	I	D	R	I	Y	E	I	E	K	E	T	R	H	D	V
Template Known Secondary structure			T	T				.	.						T	S																		.	.	.						T	S	S														.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.																									.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.			.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P	Y	W	R	Q	L	I	D	G	I	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q
Query Conservation
Alig confidence															.	.	.	.																																.
Template Conservation															.	.	.	.																																.
Template Sequence		V	A	F	T	R	A	V	S	E	T	P	A	L	.	.	.	.	G	E	E	R	K	W	V	H	Y	G	L	T	S	T	D	V	V	D	T	A	L	S	Y	I	L	K	Q	A	N	E	I	.	I	L	K	D	L	E	N	F	V	S	I	L	A	N	K	A	K	E	H	K	Y	T	I	M	M	G	R	T	H	G	V
Template Known Secondary structure										T		T	T		.	.	.	.		G	G	G	G	G	T	T	T	T																						.																			T	T	T								T	T
Template Predicted Secondary structure															.	.	.	.																																.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	.	.	.	I	L	G	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	W	N	P	Y	T	T	Q	I	E	P
Query Conservation																															.	.	.
Alig confidence																															.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence		H	A	E	P	T	T	F	G	L	K	L	G	L	W	Y	E	E	M	K	R	N	V	E	R	F	K	Q	A	A	N	T	V	R	V	G	K	L	S	G	A	V	G	T	Y	A	N	I	D	P	.	.	.	.	.	.	.	.	F	V	E	K	Y	V	C	E	N	L	G	L	E	A	A	P	I	S	T	Q	T	L	Q
Template Known Secondary structure																																	T								T	T	S	S		T	T	S			.	.	.	.	.	.	.	.										T	T					S	S		S	S	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	.	.	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M	P	H	K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		R	D	R	H	A	H	Y	M	S	T	L	A	L	I	A	T	S	I	E	K	M	A	V	E	I	R	G	L	Q	K	S	E	T	R	E	V	E	E	A	F	A	K	G	Q	K	G	S	S	A	M	P	H	K	R	N	P	I	G	S	E	N	M	T	G	L	A	R	V	I	R	G	Y	M	M	T	A	Y	E	N	V
Template Known Secondary structure		T																												T	S	T	T	T		S							T	T			S		S	S		T	T																											T	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.
Predicted Secondary structure																		.																																				.																	.	.
Query SS confidence																		.																																				.																	.	.
Query Sequence		P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	.	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D	.	H	N	W	E	V	L	A	E	P	I	Q	T	V	M	R	R	.	.	Y	G	I	E	K	P	Y	E	K
Query Conservation																		.																																				.																	.	.
Alig confidence				.														.																																				.																	.	.
Template Conservation				.
Template Sequence		P	L	.	W	H	E	R	D	I	S	H	S	S	A	E	R	V	I	L	P	D	A	T	I	A	L	N	Y	M	L	N	R	F	G	N	I	V	K	N	L	T	V	Y	P	E	N	M	K	R	N	M	T	R	T	Y	G	L	I	Y	S	Q	R	V	M	L	T	L	I	D	K	G	M	V	R	E	E	A	Y	D	I
Template Known Secondary structure				.		T	T			S																														T													T	T	T	T	T	G	G	G											T	T
Template Predicted Secondary structure				.
Template SS confidence
		298	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		L	K	E	L	T	R	G	K	R	V	D	A	E	G	M	K	Q	F	I	D	G	L	.	.	.	A	L	P	E	E	E	K	A	R	L	K	A	M	T	P	A	N	Y	I	G	R	A	I	T	M	V	D	E	L
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		V	Q	P	K	A	M	E	A	W	E	T	Q	V	Q	F	K	E	L	V	E	A	D	E	R	I	T	S	K	L	T	Q	E	E	I	N	E	C	F	N	Y	E	H	H	M	Q	H	V	D	T	I	F	E	R	L
Template Known Secondary structure													T									T						T	T	S									T		G	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430