Job Description P0AB89 Confidence 100.00% Date Thu Jan 5 11:14:54 GMT 2012 Rank 16 Aligned Residues 413 % Identity 18% Template c2e9fC_ PDB info PDB header:lyase Chain: C: PDB Molecule:argininosuccinate lyase; PDBTitle: crystal structure of t.th.hb8 argininosuccinate lyase complexed with2 l-arginine Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	Y	G	D	K	V	S	A	L	R	G	I	F	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V	A	S	F	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V	.
Query Conservation																																																																																	.
Alig confidence							.	.	.	.	.	.																										.	.	.																			.	.	.	.																			.
Template Conservation							.	.	.	.	.	.																										.	.	.																			.	.	.	.
Template Sequence		R	F	N	A	S	.	.	.	.	.	.	L	A	F	D	R	A	L	W	R	E	D	L	W	Q	N	R	V	H	A	R	M	L	H	A	V	.	.	.	G	L	L	S	A	E	E	L	E	A	I	L	K	G	L	D	R	I	.	.	.	.	E	E	E	I	E	A	G	T	F	P	W	R	E	E	L	E	D	V	H
Template Known Secondary structure							.	.	.	.	.	.					G	G	G																			.	.	.	T	S	S																.	.	.	.							T		S				G	G	G		S
Template Predicted Secondary structure							.	.	.	.	.	.																										.	.	.																			.	.	.	.
Template SS confidence
		20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	M	L	K	T	A	R	D	E	V	I	L	P	Y	W	R	Q	L	I	D	G	I	K	D	L	A	V	Q	Y	R	D	I	.	.	P	L	L	S	R	T	H
Query Conservation																																																																									.	.
Alig confidence														.	.	.	.	.	.																															.																							.	.
Template Conservation														.	.	.	.	.	.																															.
Template Sequence		M	N	L	E	A	R	L	T	E	L	V	G	.	.	.	.	.	.	P	P	G	G	K	L	H	T	A	R	S	R	N	D	Q	V	A	T	D	L	R	L	Y	L	R	G	A	I	D	E	.	L	L	A	L	L	L	A	L	R	R	V	L	V	R	E	A	E	K	H	L	D	P	L	Y	V	L	P	G	Y	T	H
Template Known Secondary structure														.	.	.	.	.	.	G	G	G	G	G	T	T	T	T																						.																			T	T	T	T	T								T
Template Predicted Secondary structure														.	.	.	.	.	.																															.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		G	Q	P	A	T	P	S	T	I	G	K	E	M	A	N	V	A	Y	R	M	E	R	Q	Y	R	Q	L	N	Q	V	E	I	L	G	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E	V	D	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	W	N	.	.	P	Y	T	T	Q	I	E
Query Conservation																																																																									.	.
Alig confidence																																							.														.	.	.	.	.																.	.
Template Conservation																																							.														.	.	.	.	.
Template Sequence		L	Q	R	A	Q	P	V	L	L	A	H	W	F	L	A	Y	Y	E	M	L	K	R	D	A	G	R	L	E	D	A	K	E	R	L	N	E	S	.	P	L	G	A	A	A	L	A	G	T	G	F	P	.	.	.	.	.	I	D	R	H	F	T	A	R	E	L	G	F	K	A	P	M	R	N	S	L	D	A	V	A
Template Known Secondary structure		T																																	T		S	B	.		T	T		T	T	S	S			S	S		.	.	.	.	.										T	T		S	S	B		S
Template Predicted Secondary structure																																							.														.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	.	.	L	N	H	F	K	Q	K	T	I	A	G	E	I	G	S	S	T	M	P	H	K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K
Query Conservation																																	.	.
Alig confidence																																	.	.								.
Template Conservation																																										.
Template Sequence		S	R	D	F	A	L	E	V	L	S	A	L	N	I	G	M	L	H	L	S	R	M	A	E	E	L	I	L	Y	S	T	E	E	F	G	F	V	E	V	P	.	D	A	F	A	T	G	S	S	I	M	P	Q	K	K	N	P	D	I	L	E	L	I	R	A	K	A	G	R	V	L	G	A	F	V	G	L	S	A	V
Template Known Secondary structure																															T	S	T	T	T							.	G	G	G					S	S	S	T	T													T
Template Predicted Secondary structure																																										.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.			400	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	K	G	V	S	K	L	E	V	N	R	D	H	L	L	D	E	L	D	H	N	W	E	V	L	A	E	P	I	Q	T	V	M	R	R	Y	G	I	E	.	.	K	P	Y	E	K	L
Query Conservation																																																																										.	.
Alig confidence																																																						.																				.	.
Template Conservation																																																						.
Template Sequence		V	K	G	L	P	L	A	Y	N	K	D	L	Q	E	D	K	E	P	L	L	D	A	L	A	T	Y	R	D	S	L	R	L	L	A	A	L	L	P	G	L	K	W	R	R	E	R	M	W	R	A	A	E	.	G	G	Y	T	L	A	T	E	L	A	D	Y	L	A	E	K	G	L	P	F	R	E	A	H	H	V	V
Template Known Secondary structure			T	T			S	S			G	G	G	G	G	G																						G	G	G													S	.		S	S	T	T											T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.								.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																							.	.	.																				.	.	.	.	.	.	.
Query SS confidence																							.	.	.																				.	.	.	.	.	.	.
Query Sequence		K	E	L	T	R	G	K	R	V	D	A	E	G	M	K	Q	F	I	D	G	L	.	.	.	A	L	P	E	E	E	K	A	R	L	K	A	M	T	P	A	N	Y	I	.	.	.	.	.	.	.	G	R	A	I	T	M	V	D	E	L
Query Conservation																							.	.	.																				.	.	.	.	.	.	.
Alig confidence																							.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	L	V	R	R	L	V	E	E	G	R	A	L	K	D	L	T	L	E	E	L	Q	A	H	H	P	L	F	A	E	D	A	L	P	L	L	R	L	E	T	A	I	H	R	R	R	S	Y	G	G	T	A	P	E	A	V	R	E	R
Template Known Secondary structure												T			S	S	S											T	T			G	G	G	G	G	G	S	S					T	T	S			S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.