Job Description P0A722 Confidence 99.95% Date Thu Jan 5 11:04:33 GMT 2012 Rank 15 Aligned Residues 203 % Identity 20% Template c3jqyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:polysialic acid o-acetyltransferase; PDBTitle: crystal strucutre of the polysia specific acetyltransferase neuo Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure									.	.	.	.																	.	.	.	.	.																			.	.	.	.
Query SS confidence									.	.	.	.																	.	.	.	.	.																			.	.	.	.
Query Sequence		K	S	A	F	V	H	P	.	.	.	.	T	A	I	V	E	E	G	A	S	I	G	A	N	A	H	I	.	.	.	.	.	G	P	F	C	I	V	G	P	H	V	E	I	G	E	G	T	V	L	.	.	.	.	K	S	H	V	V	V	N	G	H	T	K	I	G	R	D	N	E	I	Y	Q	F	A	S	I	G	E
Query Conservation									.	.	.	.																	.	.	.	.	.																			.	.	.	.
Alig confidence									.	.	.	.																	.	.	.	.	.																			.	.	.	.																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		D	S	F	S	V	D	D	N	G	S	G	N	V	F	V	C	G	D	L	V	N	S	K	E	N	K	V	Q	F	N	G	N	N	N	K	L	I	I	E	D	D	V	E	C	R	W	L	T	V	I	F	R	G	D	N	N	Y	V	R	I	H	K	N	S	K	I	K	G	D	I	V	A	T	K	G	S	K	.	.	.
Template Known Secondary structure										S	S	S									S	S		B	S							S	S	S							T	T												S	S	S							T	T											S	S			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	N	Q	D	L	K	Y	A	G	E	P	T	R	V	E	I	G	D	R	N	R	I	R	E	S	V	T	I	H	R	G	T	V	Q	G	G	G	L	T	K	V	G	S	D	N	L	L	M	I	N	A	H	I	.	A	H	D	C	T	V	G	N	R	C	I	L	A	N	N	A	T	L	A	G	H	V	S	V	D	D
Query Conservation																																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	I	G	R	R	T	T	I	G	A	G	F	E	V	.	.	.	.	V	T	D	K	C	N	V	T	I	G	H	D	C	M	I	A	R	D	V	I	L	R	A	S	D	G	H	P	I	F	D	I	H	S	K	K	R	I	N	W	A	K	D	I	I	I	S	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T					T	T				.	.	.	.			S	S	S						T	T					S	S						S		S	S			B		T	T	T			B											S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
															106	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	I	I	G	G	M	T	A	V	H	Q	F	C	I	I	G	A	H	V	M	V	G	G	C	S	G	V	A	Q	D	V	P	P	Y	V	I	A	Q	G	N	H	A	T	P	F	G	V	N	I	E	G	L	K	R	R	G	F	S	R	E	A	I	T	A	I	R	N	A	Y	K	L	I	Y	R	S	G	K	T	L
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		Y	V	W	V	G	R	N	V	S	I	M	K	G	V	S	V	G	S	G	S	V	I	G	Y	G	S	I	V	T	K	D	V	P	S	M	C	A	A	A	G	N	P	A	K	I	I	K	R	N	I	I	W	A	R	T	D	K	A	E	L	I	S	D	D	.	.	.	.	.	.	K	R	C	S	S	Y	H	A	K	L
Template Known Secondary structure		S					S	S					T	T					T	T					T	T					S		B		T	T						T	T							S					S		T	T			S	G	G	G		.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.
		230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		243	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions