|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | K | S | A | F | V | H | P | T | A | I | V | E | E | G | A | S | I | G | A | N | A | H | I | G | P | F | C | I | V | G | P | H | V | E | I | G | E | G | T | V | L | K | S | H | V | V | V | N | G | H | T | K | I | G | R | D | N | E | I | Y | . |
. |
. |
. |
. |
Q | F | A | S | I | G | E | V | N | Q | D | L | K |
Query Conservation |   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|   | . | . | . | . | . |   |   |
|   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|   |   |
|   |
|   |   | . |
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
Template Sequence |   |
S | A | S | G | A | S | V | S | G | Y | A | V | I | K | G | D | T | V | I | G | E | N | V | L | V | S | Q | R | A | Y | L | D | N | . |
A | W | X | G | K | G | S | N | A | Q | E | N | C | Y | I | I | N | . |
S | R | L | E | R | N | C | V | T | A | H | G | G | K | I | I | N | A | H | L | G | D | X | I | F | T | G | F |
Template Known Secondary structure |   |
|
| T | T |
|  |  |
| T | T | S |  |  |  | S | S |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |  | . |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |  | . |  |  |  |  |  | S |
|  |  |
| T | T |
|  |  |  | S |  |  |  |  |  | T |
|  |  |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  | . |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  | . |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | |
. | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
  |
  |   |
77 | . | . | 80 | . | |
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |
|
| . | . | . | . |
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | G | E | P | . |
. |
. |
. |
T | R | V | E | I | G | D | R | N | R | I | R | E | S | V | T | I | H | R | G | T | V | Q | G | G | G | L | T | K | V | G | S | D | N | L | L | M | I | N | A | H | I | A | H | D | C | T | V | G | N | R | C | I | . |
L | A | N | N | A | T | L | A | G | H | V | S | V | D | D | F | A |
Query Conservation |   |
  |   |   |   |   | . | . | . | . |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   | . |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|   |   |
|
|
|
|
|
|
|   |
| . | . |
|
|
|
|
|   |   |
|
|   |
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|   |
|
|   |   |
|
Template Sequence |   |
N | S | F | L | Q | G | S | E | S | S | P | L | K | I | G | D | G | C | V | V | X | P | H | T | I | I | D | L | E | . |
. |
. |
. |
. |
E | P | L | E | I | P | A | G | H | L | V | W | G | . |
. |
Y | I | R | N | K | A | D | L | A | A | H | S | I | S | F | E | E | F | A | K | V | D | G | E | V | T | X | G | R | X | T |
Template Known Secondary structure |   |
T |
|  |  |  |
|
| S | S | S |
|  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |
| S | . | . | . | . | . | S |
|  |  |  |
| S | S |  |  |  |
| S | . | . |  |  | S | S |  |  |  |  |  |  | S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  | . | . |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
335 | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 370 | . | . | . | . | . | . | |
|
. | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
  |
  |   |
152 | . | . | |
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
. | . | |
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  | . |
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|  |  | . |
|
| . | . | . |
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | G | . |
G | M | T | A | V | H | Q | F | C | I | I | G | A | H | V | M | V | G | G | C | S | G | V | A | Q | D | V | . |
P | P | . |
. |
. |
Y | V | I | A | Q | G | N | H | A | T | P | F | G | V | N |
Query Conservation |   |
  |
|
| . |   |   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|   |
|   |
|
|
| . |
|
| . | . | . |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |
|   |
Template Sequence |   |
F | R | G | K | G | G | P | F | L | D | S | F | K | K | R | I | K | R | I | L | S | E | N | G | K | N | F | T | F | N | I | I | Q | P | Y | Q | D | G | D | P | R | G | X | Y | P | T | I | L | I | Q | P | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| S | S | T | T | T | T |
|
|
|
|  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
408 | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . |
  |