 |
Job Description | P39375 | Confidence | 4.12% | Date | Wed Jan 25 15:20:53 GMT 2012 |
Rank | 59 | Aligned Residues | 69 |
% Identity | 9% | Template | c3no9C_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:fumarate hydratase class ii; |
PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis
|
Resolution | 2.48 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | S | L | Q | A | V | L | P | E | I | S | G | N | K | T | S | S | L | R | K | S | V | C | S | D | L | L | T | L | F | N | S | P | H | S | A | L | P | S | L | L | V | S | G | M | P | E | W | Q | V | H | N | P | S | D | K | H | L | Q | S | W | Y | C | R | Q | L | R | S | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|   |
|
|
|   |   |
|
|
|
|
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |   |
|
|
|   |
| . | . |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
Template Sequence |   |
R | T | H | L | M | D | A | V | P | V | T | L | G | Q | E | F | S | G | Y | A | R | Q | I | E | A | G | I | E | R | V | R | A | C | L | P | R | L | G | E | L | A | I | G | G | T | A | . |
. |
V | G | T | G | L | N | A | P | D | D | F | G | V | R | V | V | A | V | L | V | A | Q | T |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T |  |  |
| T | T |
| T | T | . | . | T | S | S |
| T | T | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | |
|
. | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|