|   |
437 | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | |
. | . | 510 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
V | C | F | P | T | G | N | I | A | P | E | G | S | V | I | K | A | T | A | I | D | P | S | V | V | G | E | D | G | V | Y | H | H | T | G | R | V | R | V | F | V | S | E | A | Q | A | I | K | A | I | K | R | E | E | I | V | Q | G | D | I | M | V | V | I | G | G | G | P | S | G | T | . |
G | M | E | E | T | Y | Q | L |
Query Conservation |   |
|   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   | . | . |   |   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
Template Sequence |   |
V | T | L | L | N | L | P | L | Q | N | F | G | Q | R | S | A | F | W | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | I | V | T | V | R | C | Y | H | D | N | S | K | V | R | D | V | L | S | Q | . |
. |
N | G | K | G | K | V | L | V | V | D | G | H | G | S | C | H | K | A | L | X | G | D | Q | L | A | I |
Template Known Secondary structure |   |
|  |  |
|
|
|
|
|  |  |
| S | S |
| S |
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  | T | S | . | . |
|
| T | T |  |  |  |  |  |  |
| T | T |
|
| S | S |  |  |  |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
516 | . | . | . | 520 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | |
|
|
. | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | |
|
|
|
. | . | . | . | . | . | . | . | . | 570 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |
|  |  |  |  |
|
|
|  |  |  |  | . | . | . | . |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | A | L | K | H | I | . |
. |
. |
. |
. |
. |
S | W | G | K | T | V | S | L | I | T | D | A | R | F | S | G | V | S | T | G | A | C | . |
. |
. |
F | G | H | V | S | P | E | A | L | A | G | G | P | I | G | K | . |
. |
. |
. |
L | R | D | N | D | I | I | E | I | A | V | D |
Query Conservation |   |
|   |
|
|   |
|   | . | . | . | . | . | . |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   | . | . | . |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |
|   |
|
|   |
|
|
|
|   |
|   |
|
|
|   |
|   |
|
|   |
|
Template Sequence |   |
L | A | I | K | N | D | W | E | G | V | I | I | Y | G | A | V | R | D | V | V | A | X | S | E | X | D | L | G | I | K | A | L | G | T | S | P | F | K | T | E | K | R | G | A | G | . |
Q | V | N | V | T | L | T | X | Q | N | Q | I | V | E | P | G | D | Y | L | Y | A | D | W | N |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  | T | T | S | S | S |  |  |  |  |  |  |  |
| S |
|
|
|
|
|
| S |
|
| . |  |  | S |
|
|  |  |  | T | T |  |  |  |
| T | T | S |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . |  |  |
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |