 |
Job Description | P77596 | Confidence | 13.42% | Date | Thu Jan 5 12:30:53 GMT 2012 |
Rank | 92 | Aligned Residues | 72 |
% Identity | 13% | Template | d1fxza2 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.80 |
|
 |
  |   |
426 | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | A | K | A | K | G | L | T | S | T | V | C | F | P | T | G | N | I | A | P | E | G | S | V | I | K | A | T | A | I | D | P | S | V | V | G | E | D | G | V | Y | H | H | T | G | R | V | R | V | F | V | S | E | A | Q | A | I | K | A | I | K | R | E | E | I | V | Q | G | D | I | M | V | V | I | G | G | G | P | S |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
  |   |   |
|
|   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|   |   |
|   |
|
| . | . | . | . |   |
|
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |
|
|
|   |
|
| . | . | . | . |
|   |
Template Sequence |   |
S | L | D | F | P | A | L | S | W | L | R | L | S | A | E | F | G | S | L | R | K | N | A | M | F | V | P | H | Y | N | L | N | A | N | S | I | . |
. |
. |
. |
I | Y | A | L | N | G | R | A | L | I | Q | V | V | N | C | N | G | E | R | V | . |
F | D | G | E | L | Q | E | G | R | V | L | I | V | . |
. |
. |
. |
P | Q |
Template Known Secondary structure |   |
T | T | T | S | G | G | G | T | T | T | T |
|
|  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  | T | T |
|
|  |  | . | . | . | . |  |  |  |  |  | S |  |  |  |  |  |  |  |
| T | T | S |
|  |  | . |  |  |  |  |  |  | T | T |
|  |  |  |  | . | . | . | . |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
327 | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | |
|
|
|
. | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | |
. | . | . | . | . | . | . | 390 | . | . | . | . | . | |
|
|
|
. | . |
  |
  |   |
506 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
G |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
N |
Template Known Secondary structure |   |
T |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
398 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|