Return to main results Retrieve Phyre Job Id

Job DescriptionP06612
Confidence84.62%DateThu Jan 5 10:59:12 GMT 2012
Rank60Aligned Residues63
% Identity16%Templated2hr3a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   493......500.........510..... ....520.........530.. .......540.........550.....
Predicted Secondary structure 








.
........



Query SS confidence 






















.
















. . . . . . . .






















Query Sequence  RPSTYASIISTIQDRGYVRVENR. RFYAEKMGEIVTDRLEE. . . . . . . . NFRELMNYDFTAQMENSLDQVAN
Query Conservation 





 

  
  
 

    
. 
 

 

  
   
  ........    
     

  
  

 
  
Alig confidence 






















.
















........






















Template Conservation     


  
  

  


 
 
   
 

  
                      
  

   
      
 
Template Sequence  RSSNLAALLRELERGGLIVRHARTRVSLSSEGRRNLYGNRAKREEWLVRAXHACLDESERALLAAAGPLLTR
Template Known Secondary structure 
TTS





Template Predicted Secondary structure 













Template SS confidence 







































































   63......70.........80.........90.........100.........110.........120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions