Job Description P06612 Confidence 72.93% Date Thu Jan 5 10:59:12 GMT 2012 Rank 99 Aligned Residues 73 % Identity 10% Template d2fbka1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.		.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		R	P	S	T	Y	A	S	I	I	S	T	I	Q	D	R	G	Y	V	R	V	E	N	R	R	F	Y	A	E	K	M	G	E	I	V	T	D	R	L	E	E	N	F	R	E	L	M	N	Y	D	F	T	A	Q	M	E	N	S	L	D	Q	V	A	N	H	.	E	A	E	W	K	A	V	L	D	H	F	F	S	D	F
Query Conservation																																																																		.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	P	S	T	S	N	R	I	V	R	L	L	E	K	G	L	I	E	R	R	E	A	S	I	R	L	T	P	Q	G	R	A	L	V	T	.	.	.	.	.	.	.	.	.	.	.	.	H	L	L	P	A	H	L	A	T	T	Q	R	V	L	A	P	L	S	A	Q	E	Q	R	T	L	E	E	L	A	G	R	M
Template Known Secondary structure			S	G	G	G	S	S									T	S								B												.	.	.	.	.	.	.	.	.	.	.	.															T	T	S		T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.													.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		572	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	Q	L	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	G	L	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions