Job Description P06612 Confidence 95.77% Date Thu Jan 5 10:59:12 GMT 2012 Rank 15 Aligned Residues 96 % Identity 21% Template d1nuia1 SCOP info DNA primase core DNA primase core Primase fragment of primase-helicase protein Resolution 2.90

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	K	A	L	V	I	V	E	S	P	A	K	A	K	T	I	N	K	Y	L	G	S	D	Y	V	V	K	S	S	V	G	H	I	R	D	L	P	T	S	G	S	A	A	K	K	S	A	D	S	T	S	T	K	T	A	K	K	P	K	K	D	E	R	G	A	L	V	N	R	M	G	V	D	P	W	H	N	W	E
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	K	K	I	V	V	T	E	G	E	I	D	M	L	T	V	M	E	L	Q	D	C	K	Y	P	V	V	S	L	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B	S						S	S												T	T		S						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Y	E	V	L	P	G	K	E	K	V	V	S	E	L	K	Q	L	A	E	K	A	D	H	I	Y	L	A	T	D	L	D	R	E	G	E	A	I	A	W	H	L	R	E	V	I	G	G	D	D	A	R	Y	S	R	V	V	F	N	E	I	T	K	N	A	I	R	Q	A
Query Conservation
Alig confidence		.	.	.	.																																													.	.
Template Conservation		.	.	.	.																																													.	.
Template Sequence		.	.	.	.	G	A	S	A	A	K	K	T	C	A	A	N	Y	E	Y	F	D	Q	F	E	Q	I	I	L	M	F	D	M	D	E	A	G	R	K	A	V	E	E	A	A	Q	V	L	P	.	.	A	G	K	V	R	V	A	V	L	P	C	K	D	A	N	E	C	H	L	N
Template Known Secondary structure		.	.	.	.	T	T	T	T								T					T	T	B	S								S	S														S		.	.	T	T	T							S	S	S	S						T	T
Template Predicted Secondary structure		.	.	.	.																																													.	.
Template SS confidence
						181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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