Return to main results Retrieve Phyre Job Id

Job DescriptionP06612
Confidence23.10%DateThu Jan 5 10:59:12 GMT 2012
Rank262Aligned Residues23
% Identity26%Templatec3lpeF_
PDB info PDB header:transferaseChain: F: PDB Molecule:dna-directed rna polymerase subunit e''; PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   728.730.........740.........750.........760.........770
Predicted Secondary structure 



































Query SS confidence 










































Query Sequence  YMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYF
Query Conservation 
  


  
     
                    

 
    
Alig confidence 



..







..................










Template Conservation 



..  
  
  ..................   

 


  
Template Sequence  MRAC. . LKCKYLTN. . . . . . . . . . . . . . . . . . DEICPICHSPT
Template Known Secondary structure 
..TTT
BS..................SSB
TTT

B
Template Predicted Secondary structure 



..







..................










Template SS confidence 










































   1... .....10.. .......20...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions