Job Description P06612 Confidence 95.58% Date Thu Jan 5 10:59:12 GMT 2012 Rank 16 Aligned Residues 93 % Identity 17% Template c3h0gI_ PDB info PDB header:transcription Chain: I: PDB Molecule:dna-directed rna polymerase ii subunit rpb9; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

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		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.			.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		C	P	T	C	G	R	K	M	G	I	R	T	A	S	T	G	V	.	.	F	L	G	C	S	G	Y	A	L	P	P	K	E	R	C	K	T	T	I	N	L	V	P	E	N	E	V	L	N	V	L	E	G	E	D	A	E	T	N	A	L	R	A	K	R	R	C	P	K	C	G	T	A	M	D	S	Y	L	I	D	P
Query Conservation																			.	.
Alig confidence																			.	.							.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	I	E	C	N	N	M	L	Y	P	R	E	D	K	V	D	R	V	L	R	L	A	C	R	N	.	.	.	.	.	.	.	.	C	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	I	A	A	T
Template Known Secondary structure			S	S	S										T	T	T								S	S	.	.	.	.	.	.	.	.	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.									.	.	.																																							.	.	.	.	.	40
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.							.	.	720	.	.	.	.	.	.	.			.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.											.	.
Query SS confidence																																											.	.	.	.	.	.											.	.
Query Sequence		K	R	K	L	H	V	C	G	N	N	P	T	C	D	G	Y	E	I	E	E	G	E	F	R	I	K	G	Y	D	G	P	I	V	E	C	E	K	C	G	S	E	.	.	.	.	.	.	M	H	L	K	M	G	R	F	G	K	.	.	Y	M	A	C	T	N	E	E	C	K	N	T
Query Conservation																																											.	.	.	.	.	.											.	.
Alig confidence																																											.	.	.	.	.	.											.	.							.	.
Template Conservation																																																																			.	.
Template Sequence		S	K	V	Y	R	H	E	L	Q	S	S	N	V	E	N	T	T	V	S	H	D	A	S	T	D	P	T	L	P	R	S	D	K	E	C	P	R	C	H	Q	H	E	A	V	F	Y	Q	T	H	S	R	R	G	D	T	M	M	T	L	I	Y	V	C	V	H	.	.	C	G	F	A
Template Known Secondary structure		S									S		S		T	T		T	T		T	T	S	T	T		S	S	S		B			S			S	S	S			S										S	S												S	S	.	.	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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