Job Description P06612 Confidence 84.28% Date Thu Jan 5 10:59:12 GMT 2012 Rank 64 Aligned Residues 79 % Identity 20% Template c3floD_ PDB info PDB header:transferase Chain: D: PDB Molecule:dna polymerase alpha catalytic subunit a; PDBTitle: crystal structure of the carboxyl-terminal domain of yeast2 dna polymerase alpha in complex with its b subunit Resolution 2.50 Å

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		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.			.	.	.	.	.	710	.	.	.	.	.	.																	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.		.	740
Predicted Secondary structure																											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence																											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		L	H	V	C	G	N	N	P	T	C	D	G	Y	E	I	E	E	G	E	F	R	I	K	G	Y	.	.	D	G	P	I	V	E	C	E	K	C	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	H	L	K	M	G	R	F	G	K	Y	M	A	C	T	N	E	E	C	K	N	.	T	R
Query Conservation																											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence						.	.	.																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.											.
Template Conservation						.	.	.																																																											.	.
Template Sequence		E	L	S	C	.	.	.	P	S	C	D	K	R	F	P	F	G	G	I	V	S	S	N	Y	Y	R	V	S	Y	N	G	L	Q	C	K	H	C	E	Q	L	F	T	P	L	Q	L	T	S	Q	I	E	H	S	I	R	A	H	I	S	L	Y	Y	A	G	W	.	.	L	Q	C	D	D	S	T	C	G	I	V	T	R
Template Known Secondary structure						.	.	.	T	T	T								S	S	S			S	S					T	T					T	T	T			B																							T			.	.				S		T	T	T					S
Template Predicted Secondary structure						.	.	.																																																											.	.
Template SS confidence
		1284	.	.	.				.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.			.	.	.	.	1350	.	.	.	.	.	.	.	.
		741	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	R	N	G	E	V	A	P	P	K	E	D	P	V	P	L	P	E	L	P	C	E	K	S	D	A	Y	F	V	L	R	D	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	S	V	F	G	K	.	.	.	.	.	.	.	.	.	.	.	.	R	C	L	N	D	G	C	T	G	V	M	R	Y	K	Y	S
Template Known Secondary structure					S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	B		S	S	T	T				B				S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1359	1360	.	.	.	.	.													.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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